Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3994 |
Symbol | |
ID | 8139368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4578552 |
End bp | 4579322 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644871610 |
Product | fatty acid hydroxylase |
Protein accession | YP_003023768 |
Protein GI | 253702579 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00000000572359 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGAAAG CAGATATCGT TCGTTTGGCC TTTTTCCTCG GTACCTTGGC TGTCGTGGGG GCTTGGGAAA TCCTGGCGCC TCGCCGCGTT CTTACGGACA GCAAAAGAAG GCGCTGGTTT ACCAACCTCG GGATAGTAGT CGTCGACACA GCCTTTGCCC GCATTCTCCT GCCGCTTCTC CCGGTCGGCA TGGCTCTAAT TACCCACCAA CCGGGAGTGT TGCCGTATTG GCTGAAGGTC GTCATATGTA TCGTCGCCCT TGATTTCGTC ATTTACCTTC AACATGTCCT TTTCCACTTC GTCCCGGTAT TTTGGCGTCT GCACAGGATG CATCACAGCG ACCTCGACAT CGATGTGACC ACCGGAAACC GTTTTCATCC CTTCGAAATC GTCATTTCTC TCGGCATCAA GATGGCGGCC GTCGCTTTGA TAGGGGCACC GGTCCTGGCG GTCGTCGTCT TCGAGGTCTT ATTGAATGCC ACCTCCCAGT TCAATCATGG CAACATCCGG ATTCCGGTAG CTGTCGACAG GTATTTGCGC CTCTTTGTGG TGACCCCCGA CATGCATCGC GTACACCATT CCGTCATCCC CCGGGAAACC AACAGCAACT TTGGTTTCAA CCTCCCCTGG TGGGACCGCC TATGCGGAAC TTACCGGCCC CAACCCGAGA AAGGACATGA AGGCATGACC ATCGGCCTGA ACGACTTTCG CGACCCGGCG ATGCTAACCC TCTTTCACCT TCTGATCCAG CCGTTCACCC ATAAGCGTTA G
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Protein sequence | MAKADIVRLA FFLGTLAVVG AWEILAPRRV LTDSKRRRWF TNLGIVVVDT AFARILLPLL PVGMALITHQ PGVLPYWLKV VICIVALDFV IYLQHVLFHF VPVFWRLHRM HHSDLDIDVT TGNRFHPFEI VISLGIKMAA VALIGAPVLA VVVFEVLLNA TSQFNHGNIR IPVAVDRYLR LFVVTPDMHR VHHSVIPRET NSNFGFNLPW WDRLCGTYRP QPEKGHEGMT IGLNDFRDPA MLTLFHLLIQ PFTHKR
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