Gene GM21_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3639 
Symbol 
ID8139013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp4216920 
End bp4217606 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content60% 
IMG OID644871260 
ProductABC transporter related 
Protein accessionYP_003023418 
Protein GI253702229 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones157 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCAA TTCAGAACGT AGTGAAGACC TTCAACAGCG GGCGACCAAA CGAGTTGTGC 
GCGGTGCGGG AGGTTTCCCT GGAGATCGGG TTGGATCAGG CCACGGCCCT GGTCGGACCG 
AGCGGTTCGG GGAAAACGAC GCTCCTCTCC TTGATCGGAT GCATGGCGCG CCCCACATCC 
GGCCGCATCT TCGTCAAGGG AGAGGAGGTC ACCAGCCTGC CGGAACGGTT TCTTACCAGG 
ATCCGGAGAT CGACCTTCGG CTTCGTCTTT CAGCGGCACA ATCTGATAAA GGGAATTTCC 
GTGCTGGAGA ACGTCATGGC GCCTGCTTAC CCTGAGGGGG AGCCTTTCCC GCTGCTTAGG 
CAAAGGGCTC TCGATACCTT GGAGCGATTG AACCTGAAGC AGCGTGCGGA CGCTAAAGTG 
GAGTGGCTTT CCGGGGGGGA GGCGCAGAGG GTGGCAATAG CTCGCGCCAT GATCAACCGT 
CCAGCCGTCA TGATAGCCGA TGAGCCGACG GCGCACCTCG ATACGAAGTT GTCCTACGAC 
TTCATGTCGC TTATGAAGGA AGTGAAAGAC GCCGGGACCG CGATCATCCT TGCCAGCCAC 
GACCCCATCG TCCATGGCTG CGACCTGATC GGCCGGGTAG TGGAGCTGCG TGACGGGCGG 
GTAGTGACCG AGAGGAACCC GAGGTGA
 
Protein sequence
MISIQNVVKT FNSGRPNELC AVREVSLEIG LDQATALVGP SGSGKTTLLS LIGCMARPTS 
GRIFVKGEEV TSLPERFLTR IRRSTFGFVF QRHNLIKGIS VLENVMAPAY PEGEPFPLLR 
QRALDTLERL NLKQRADAKV EWLSGGEAQR VAIARAMINR PAVMIADEPT AHLDTKLSYD 
FMSLMKEVKD AGTAIILASH DPIVHGCDLI GRVVELRDGR VVTERNPR