Gene GM21_3486 details

Gene Information

• Locus tag: GM21_3486
• Symbol: rnhB
• ID: 8138858
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 4031036
• End bp: 4031728
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644871106
• Product: ribonuclease HII
• Protein accession: YP_003023266
• Protein GI: 253702077
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 7.83374e-19
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGACCGGTC TTTTTCCCGA CAACCCGAAG TCGCCGATTG ACCTGCTCGC GCTCGAAGGG 
CAGGCGCTTC GTCGCGGCTT TTTTCGGATA GCGGGTATCG ATGAGGCAGG GCGCGGCCCA 
CTGGCGGGGC CGGTCGTGGC CGCCGCGGTG ATCCTCCCTC CCGGGTTGCT CCTCCCCGGG 
GTCAATGACT CCAAACAGTT GACTGAAGAA AAGAGGGAAG AGCTCTTCGA CGTCATCCAT 
CGCGAGGCGC TCGCCGTCGG CGTCGGCATC GGCGACCATG CCCTCGTCGA CCGCATCAAC 
ATCCTCCAGG CGACCCTGAG CGCCATGCGC GACGCGGTCC GTGCCTTGAG CATGACCCCC 
GGTTTCCTCC TCATTGACGG CATCTCCAAT ATCCCCATGA ACATCCCGCA GCGCACCGTG 
AAAAAGGGCG ACTCCCTGAG CCTTTCGATA GCGTCCGCCT CCATAATCGC CAAGGTCACC 
CGTGACCGGA TGATGGTTGA GTACGACGCC CAGTATCCCG GCTACGGCTT TGCCAGCCAC 
AAGGGGTACG GCGCCGCGTC GCACCTGGCC GCCATCGCCG AACTAGGTCC CTGTCCCATC 
CATCGCAAAA CCTTCAGCGG CGTGAAGGAG CACCTTCCTT CCCAGCCCGA CTGTGACACT 
GCAGGACCTT CCACTGGGTT ATTCTCTTTC TGA 

 

Protein sequence

MTGLFPDNPK SPIDLLALEG QALRRGFFRI AGIDEAGRGP LAGPVVAAAV ILPPGLLLPG 
VNDSKQLTEE KREELFDVIH REALAVGVGI GDHALVDRIN ILQATLSAMR DAVRALSMTP 
GFLLIDGISN IPMNIPQRTV KKGDSLSLSI ASASIIAKVT RDRMMVEYDA QYPGYGFASH 
KGYGAASHLA AIAELGPCPI HRKTFSGVKE HLPSQPDCDT AGPSTGLFSF