| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3399 |
|---|
| Symbol | |
|---|
| ID | 8138766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3930138 |
|---|
| End bp | 3931001 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644871016 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003023181 |
|---|
| Protein GI | 253701992 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 139 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTTT TGATCACCGG AAGCACCGGT TTCGTTGGGG CGAACCTGCT GCACGGCTTG
TACGCCGGGC ACGAAGCGCA TGTCACCGTC AGGCAAGGGG CCGATACCTG GCGCATAGAC
TCCTGTCTTC CTGATGTGGC TGGGGTCTGG AGGACCGATC TGGCCGACCG GGACGCGGTC
TTCGACCTGA TGGCAAATGT TCGCCCCGAG GCGGTGATCC ACGTCGCCGC TTACGGTGGC
CTCCCAGCCC AGACGGACAA GGCGAAGATG GTGGACGGGA ATCTCAATGC CACGGTCAAC
CTCCTCGATG CCGCGGTCGA CAACGACGTC GCCATCTTCA TCAACAGTGG CTCCTCCTCC
GAATACGGGG TGAAGGATCA ACCGATGCGC GAGGACGATA ACTGTCAGCC GGTCAACTTC
TACGGGATCA CAAAACTCGC CGCCACCAAC TACTGCAGCA TGGTAGGGTG GGCCACCGGG
CGCAGGATCT GCACCCTGAG GCTCTTCTCC CCGTACGGCC AGTTCGAGCA GCCCACCCGC
CTCTACCCGA GCATCATGGA CGCGCTCAAG CGCGATGAGT CGCCGCGCCT CTCCAACCCG
ACGTCAGTGC GCGATTTCAT TGCAGTCGAG CGGGTGGTCG AGGTGTACCG CAGTATGCTC
TCCGCCCCCT TTGATCCCGG CGGGGTCTAC AACGTCGGCT CCGGAAAGCA GCAGACCTTG
CGCGAGTTTG TGGTGTCGCT CTCAGCCGGA TTGGGGAAGG AGCACCTGGA GCCGCTGTGG
GGCGTGGCGC AGAGCCGCAA GACCGAGCCG ATCCGCTGGG AGGCGGACAC GGAAAAGCTC
AGAAAACTGC TGGGAGATTT TTAA
|
|---|
| Protein sequence | MRLLITGSTG FVGANLLHGL YAGHEAHVTV RQGADTWRID SCLPDVAGVW RTDLADRDAV
FDLMANVRPE AVIHVAAYGG LPAQTDKAKM VDGNLNATVN LLDAAVDNDV AIFINSGSSS
EYGVKDQPMR EDDNCQPVNF YGITKLAATN YCSMVGWATG RRICTLRLFS PYGQFEQPTR
LYPSIMDALK RDESPRLSNP TSVRDFIAVE RVVEVYRSML SAPFDPGGVY NVGSGKQQTL
REFVVSLSAG LGKEHLEPLW GVAQSRKTEP IRWEADTEKL RKLLGDF
|
|---|
| |