| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3293 |
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| Symbol | |
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| ID | 8138655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3828514 |
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| End bp | 3830115 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644870906 |
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| Product | phosphodiesterase |
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| Protein accession | YP_003023076 |
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| Protein GI | 253701887 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTATTG ACATTACGAT AACCATAATC CTCGTGCTCG TAGCGGCCGG TATCGGTTAC
GCGATAGGGA ACGTGCTGCG CAAAAAACTC TCCAACTCCC TGGTGACCGA CGCCGAGAGC
CTGGCCGCCA AGATGATCGA GGACGCCAAG CGCCAGACCG AAGTTATGGC CATGGAAGCC
GCCGTCCAGG CAAAAGACGC GGTGTACCAG GCAAAAGAAG AGCTGGAGAA ACAGTTCGAG
CAGGAAACAC GCGAGAAACG CCGAGATCTT CAGGCTCTAG AGAAGAGGCT GCAGCAAAAG
GAAGAAAATC TCGACAAGAA GACCAACCTC TTTGACCAGC GGGACGCTGA CTTCCTGAAG
CGGGAGCAGG CGCTGGCTGT CCGCGAGCAG ACCTTGGTTA CCAGGGAGCA GACGCTGGGG
CAGAAGGAGG AAAAGCTCGA CGCGCTGGTC GGCGAGCAGA AGGCGAAACT GGAGCAGATC
GCGGGCATGA CCGCAGCCGA GGCGAAAAAG TTCCTGATGG ATTCCATGGA GGACGAGGCA
AAGCTCGATG TCGCCAAGCT GATCAAGGCG ATGGAAGAGG AAGCGAGGGA GACTGCGGAC
AAGAAGGCGA AGGAGATCCT CGCCCTCGCC ATGCAGCGTT ACGCAGGCGA GTACGTCGCC
GAGCGGAGCG TCTCCGTCGT GACCCTTCCC TCCGATGAGA TGAAGGGGCG CATCATCGGC
CGTGAGGGGC GCAACATCAG GGCGCTTGAG GCGGCTACCG GCATCGACCT TATCATCGAC
GACACCCCGG AGGCGGTCAT TCTTTCCGGA TTCAACCCGG TCAGAAGGGA AGTCGCCAAG
CTGTCGCTGC AGAAACTGAT CGCCGACGGC AGGATTCATC CCGGCCGCAT CGAGGAGGTC
GTTGCCAAGT CGCAGGAGGA AATCGAGCAG GCGATGAAGG AAGCAGGCGA GCAGGCTGCC
TTCGACTTAG GCGTGCACGG CATTCATCCA GAGATCCTCA AGCTGATCGG CAGGCTCAAA
TACCGCACCT CCTACAGCCA GAACGTGTAC CAGCACTCGC TGGAAGTAGC GTTCCTCTGC
GGCATCATGG CTGCCGAGCT CGGCATCAAC GTAAAGCAGG CCAAAAGGGC CGGCCTTCTG
CACGACCTCG GCAAGGCAGT CGACCACGAG ATCGAAGGCT CCCACGCAGT CATCGGCGCA
GACATCGCCA AGAAGTACGG CGAGTCCCCG AAGATCGTGC ACGCCATCAT GGCGCACCAC
GAGGACGAGA AGCCGGCCAC CGTGCTCGCC GTCCTGGTGC AGGCAGCGGA CGCGCTCTCC
GGAGCCCGCC CCGGCGCCCG TCGCGAGATG ATGGAGACCT ACGTGAAGCG TCTGGATGAT
CTGGAGAGGA TCGCCACCTC GTTCGACGGC GTCCTGACCT CCTTCGCCAT CCAGGCAGGC
CGCGAGATCC GCGTCATGGT CTCCAGCGAG CAGGTGACCG ATGACCGCGC GCTGGTCCTG
GCCAAGGATA TCGCCAAGAA GATCGAGACC GAGATGACCT ACCCGGGCCA GATCAAGGTG
AACGTGATCA GGGAAACCAG GGCCACCGAA TATGCCCGTT AA
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| Protein sequence | MSIDITITII LVLVAAGIGY AIGNVLRKKL SNSLVTDAES LAAKMIEDAK RQTEVMAMEA
AVQAKDAVYQ AKEELEKQFE QETREKRRDL QALEKRLQQK EENLDKKTNL FDQRDADFLK
REQALAVREQ TLVTREQTLG QKEEKLDALV GEQKAKLEQI AGMTAAEAKK FLMDSMEDEA
KLDVAKLIKA MEEEARETAD KKAKEILALA MQRYAGEYVA ERSVSVVTLP SDEMKGRIIG
REGRNIRALE AATGIDLIID DTPEAVILSG FNPVRREVAK LSLQKLIADG RIHPGRIEEV
VAKSQEEIEQ AMKEAGEQAA FDLGVHGIHP EILKLIGRLK YRTSYSQNVY QHSLEVAFLC
GIMAAELGIN VKQAKRAGLL HDLGKAVDHE IEGSHAVIGA DIAKKYGESP KIVHAIMAHH
EDEKPATVLA VLVQAADALS GARPGARREM METYVKRLDD LERIATSFDG VLTSFAIQAG
REIRVMVSSE QVTDDRALVL AKDIAKKIET EMTYPGQIKV NVIRETRATE YAR
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