Gene GM21_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3172 
Symbol 
ID8138524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3682458 
End bp3682790 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content63% 
IMG OID644870777 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_003022957 
Protein GI253701768 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones119 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCT ATTACGACCC CAAGGATCTC GGGCGCTTCG CCGAGATAGG AAAGGACGCG 
CCGGAACTGG CCGGGAAGTT CTTCGCCTAC TACAACGAGG TCTTCGCCGA GGGGGAGCTG
ACCGAACGGG AGAAGGCGCT GATAGCGCTC GCCGTAGCCC ACACCGTCCA GTGCCCCTAC
TGCATAGACG CCTACACCCG CGCCTGCCTG GAAAAGGGGT CCCATCTGGG CGAGATGACC
GAGGCCGTCC ATGTGGCGAC CGCCATCAGG GGGGGAGCAT CCCTGGTGCA TGCGGTGCAG
ATGCGCAAGA TCGCCGAGAA GCTCTCGCTT TAG
 
Protein sequence
METYYDPKDL GRFAEIGKDA PELAGKFFAY YNEVFAEGEL TEREKALIAL AVAHTVQCPY 
CIDAYTRACL EKGSHLGEMT EAVHVATAIR GGASLVHAVQ MRKIAEKLSL