Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2659 |
Symbol | |
ID | 8138001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3094807 |
End bp | 3095976 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644870263 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_003022453 |
Protein GI | 253701264 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.0000575717 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAGAGG ACGCTTTATC CTTCTGGACG GAGATACAGC GCTACGAGGA CATGCTGGCA GCCGACGCCA AAAGCTTGTG CTTCGCGCCC CTCTCGGAGC TGTACCGAAA GCTCGGCCTT CTTGACGATG CCATCATGGT GGCCGAGAAA GGGTGCGCCG CACATCCCGA CCTTCCTGCC GGTTTCCTGG CCCTTGGCAC CGCCTGTTAC GCGAAAGGGC TCACCGGCCA GGCGCGCAGC GCTCTTGAGC GTGCGGTGGC GCTCCAGCCG AATCATCTTG AGGCCCTGAA ACTCCTGGGA CAGCTCTATG TCGAACAAAA CGAGGTGGGT CTGGCGCGCA AGGTGCTGGA GCAGGTGCTA CAGCAGGACC CGGACGACCT GGAGAGTTCG CTTTTGCTGA ACTCGGTCGC CGTCCCTCCC TCCTACGAGG AGCCTGAGGA ACTGCTTGAG GATCTCGAGA TCATAGAGGA ACTTGAAGAG GTGGTGGAAG AGGTGGTGGA ACCGGCCCGC CCCCAGGCGT CTGCTGCCGC GGCACCCCTG GAAGACGACG ACATCTGGGC CATCGAGGAC CTGGAAGAGG TCGAGGTCGA GCCTCTTTCT CCGCAACGCA GCGAGGCGGC CACGCCCGAT CCGCTGACCA CTGCGACCCT GGCGGAACTG TACGTGTCGC AAGGGTTCAT CGAGAAGGCG CTGGGGATCT ACCGGGAACT CATCACCGCG CACCCGGCCA ACTCGCAGTA CCGGTTACGC TGCGCCGAAC TTCAGGAAAT GCTGGAATTG CAGCAGATGC CTGCCGGGCC CGCAGGTTCG GCAAAGGGAC TGGCTGCCGC GACAGCGCCT GCCGTGGCGG AACTGCAGGA GGAAACGGAC GAGCTCGAAA CGGGATGGGA TGTCCCTGTC GAGACCGGTG AACCGGTCGA GCCGGAAGGC GTGCCTGAAA CGGAGCGGAG CTCCAAATTG GTGATACCCG CCGCCCTGGA GACGCCGGCG ACGCTTGAAT TTCCGGCAAC CGCAGAGGCG GCGTTTGCCA TCGATTCACC GGCCGTAATG GAAGAGCCTG CCTTGGAGGC ATTGGAGACG AAGAGCGCGC CGTCCGGTGG CGCCGGCGAA GTCGAGGTCG AGCTGCAACG CTGGCTGGAA AACATAAGGA GAAGAAGAGA TGGGGTTTAA
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Protein sequence | MVEDALSFWT EIQRYEDMLA ADAKSLCFAP LSELYRKLGL LDDAIMVAEK GCAAHPDLPA GFLALGTACY AKGLTGQARS ALERAVALQP NHLEALKLLG QLYVEQNEVG LARKVLEQVL QQDPDDLESS LLLNSVAVPP SYEEPEELLE DLEIIEELEE VVEEVVEPAR PQASAAAAPL EDDDIWAIED LEEVEVEPLS PQRSEAATPD PLTTATLAEL YVSQGFIEKA LGIYRELITA HPANSQYRLR CAELQEMLEL QQMPAGPAGS AKGLAAATAP AVAELQEETD ELETGWDVPV ETGEPVEPEG VPETERSSKL VIPAALETPA TLEFPATAEA AFAIDSPAVM EEPALEALET KSAPSGGAGE VEVELQRWLE NIRRRRDGV
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