Gene GM21_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2588 
Symbol 
ID8137930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3019381 
End bp3020346 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID644870196 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003022386 
Protein GI253701197 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones146 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTAAGA CTAACATATT CATAACAGGC GCCACCGGTT TCGTTGGCTC TGCCCTTGTG 
AAACGTCTCT CACAGGCTGA TGCCTCTATT AGCGCTGCGG TTCTGGCAGG TGAAAATGCC
AAACAGTTCT CGCCGGAGAT TAGGAAGTTT ACTGTAGAAC CCCTGTCTGG TTCTAGTGAC
TACACGACCG CAATGCGTGG AGCTGACATA GTTATTCATC TGGCTGCTCG TGTTCATATC
ATGAAAGACA CAGCCAGTGA TCCCTTGAGT GAATTCCGAA AAGTTAACAT GTATGGTACC
GAGCGTCTTG CAAGGCAAGC AGCCGAAGCG GGAGTGAAAC GGTTTGTCTT CATGAGTACT
ATTGGGGTAA ACGGCAACGC ATCGGGCAGC AGGCCATTTA CCGAAACTGA CGATCCTATT
CCTCATAATC CGTATTCTGT TTCAAAACTG GAGGCGGAGT TAGCGTTGAG GAAGATATGT
GAAACAACTG GAATGCAAGT GGTTATTGTT CGAGCTCCGC TCATCTACGG CCCTGGTAAT
CCTGGCAACT TCCTTTCGCT TCTTCGCATT ACTTCAAAAG GGTTTCCTCT ACCCTTTGCC
TCAGTGTCTA ACCGTAAGAG CTTTTTATAT GTTGAAAATC TTGCCGATGC TTTGGCTTGT
TGTGCAACTC ATCCAAATGC CGCTGGCCGG ACATTTTTGA TTTCCGACGG CGATGATGTT
TCAACCCCCG ACCTGATTCG GCTCTTAGCT GCGGGGATGG GGAAAACTTC TTGCCTTTTT
CCATTTCCTT TAGCTCTCAT GCGTTTTGCT GGGAAAGTTC TTGGGAAGTC GAACGAAATG
GGCCAGTTGC TTGGATCGCT TCAGGTCGAC AGCTCCAAGA TTCGAAGAGA GCTGGGGTGG
GTTCCTCCAT TCACCATGGC GCAGGGATTT GAGAAGACCG CTGTATGGTT TAAGAACGCA
AGATGA
 
Protein sequence
MVKTNIFITG ATGFVGSALV KRLSQADASI SAAVLAGENA KQFSPEIRKF TVEPLSGSSD 
YTTAMRGADI VIHLAARVHI MKDTASDPLS EFRKVNMYGT ERLARQAAEA GVKRFVFMST
IGVNGNASGS RPFTETDDPI PHNPYSVSKL EAELALRKIC ETTGMQVVIV RAPLIYGPGN
PGNFLSLLRI TSKGFPLPFA SVSNRKSFLY VENLADALAC CATHPNAAGR TFLISDGDDV
STPDLIRLLA AGMGKTSCLF PFPLALMRFA GKVLGKSNEM GQLLGSLQVD SSKIRRELGW
VPPFTMAQGF EKTAVWFKNA R