Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2455 |
Symbol | |
ID | 8137796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 2869071 |
End bp | 2870375 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644870065 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_003022256 |
Protein GI | 253701067 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 176 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTTTC TTAAAAAAAG CGCGGCGACG CTGCTCACCC AGGTATTTCT GATTGTCCTT GGCATGGCGT CAGGCATCCT GGTGGCCCGT GTGCTCGGAC CCGACCTCAA GGGGAAGGCG GCACTCCTCA GTAACGTCGT ACAGATGCTC TCAATGATCG GTGGGCTGGG CATCGGTTCT TCCTGCGCCT TTTTCATCGC CAGGAAACAG TATCGCCCCG GCCAGATCAT ACTTCTTTCG CTGTACTGCT CGCTCGCCTT CGGCGCAGTC ACCACCGCTT TGTTCTTTCT GAGCTACCCG CTGCACAAGA AGGTATGGGA TGGGATTCCG TTCGTCCTTG TCAGCAGCAC CGCGCTGCTG ACAGTGTCGT ACATCCTGTT GAACTACCTG GTCCGGGTGG TGGCCGGATA CGACAAGATT TACGAGATGA ATGCTGTCGA CTTGGTCAAG GCGGTGCTTG GGCTCTTTTT CACCTATCTC CTCATCGAGG TCATGCAGTT GAAGCTGACC GGTTTCGTCG TCTCGCTCTA TCTTGCGGTG CTGGTGCAAG GGCTTTTCCT TTTCTGGGTG CTGCGGAAGG ACCTGACGGC CGGGTTCAGG CTGCCGGGGG GGATGTTGAA GAGCAGCATC GACTACGGGT TGAAGTCCTA CGGCATCCTG GTGATCAACT TCCTCAACTA CCGTCTCGAC ATGTTCCTTC TCAAGTACTT CAAATCAAGC GAGGAAGTCG GCTACTATTC TCTTGCGGTC GGAATGGCCG AGTTGCTGTG GCTCATGCCC AATTCCACCA TAGCGCCGCT GTTCAACCGG ATAGCAAGCG GCGAAAACAA GGATAAGTCC CTCCTTACTG TACGGACCTG TCGCTGGTCA CTTTATTCCC TCATCGCCAT CTCTGCTTTG TTGCTTTTCT GTGGCCGCTT CTTCATCGAG CTCCTCTACG GTGCCGATTA TCTACCTTCG TATCAGCCTT TTATGTTTCT GCTGCCCGGC GTCTGCCTGT TCCCTGTCTA CAAGCTCCTG GTGGTGGACC TGGCCGCACG TGGCATGCCG GGGTACGGGA CGATAACTTC GGTGGTAGCT CTGATCGCCA ACGTCGGCTT CAACCTGATC CTCATACCGC GGTTTGGCAC CGTCGGGGCG GCTGTTTCCT CGTCGATCTC TTACTCCCTG ATGTCGCTTT TAAGCATAAT CTTCTTCATG AAGGTGTCGG GCCTGCCGCT TAGCAAGATC TTCCTCATCG ATAGGGTCGA AATAGACTTT ATCAGGAACT TGCTCCCCTT TGCCAAGGGA GAAGGGCGCC GATAG
|
Protein sequence | MSFLKKSAAT LLTQVFLIVL GMASGILVAR VLGPDLKGKA ALLSNVVQML SMIGGLGIGS SCAFFIARKQ YRPGQIILLS LYCSLAFGAV TTALFFLSYP LHKKVWDGIP FVLVSSTALL TVSYILLNYL VRVVAGYDKI YEMNAVDLVK AVLGLFFTYL LIEVMQLKLT GFVVSLYLAV LVQGLFLFWV LRKDLTAGFR LPGGMLKSSI DYGLKSYGIL VINFLNYRLD MFLLKYFKSS EEVGYYSLAV GMAELLWLMP NSTIAPLFNR IASGENKDKS LLTVRTCRWS LYSLIAISAL LLFCGRFFIE LLYGADYLPS YQPFMFLLPG VCLFPVYKLL VVDLAARGMP GYGTITSVVA LIANVGFNLI LIPRFGTVGA AVSSSISYSL MSLLSIIFFM KVSGLPLSKI FLIDRVEIDF IRNLLPFAKG EGRR
|
| |