| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2428 |
|---|
| Symbol | |
|---|
| ID | 8137769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 2826498 |
|---|
| End bp | 2827607 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644870038 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_003022229 |
|---|
| Protein GI | 253701040 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 127 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTCGC GAATCATCAC CTACTGCAGC AACATCCATC CCGGCGAGTC CTGGGAGGAG
ACCTTCCGTG CGCTGCGGGA GCATGTTCCC AAGGTTAAAC AGGCGGTTTC ACCCGATGCG
CGCTTTCCCA TCGGGCTGCG CCTGTCGGCC CGCGCCGCCA GGGAACTCCT CGCCGCGGGG
CGCGCCTCCT TCGCGAGCTG GCTGCGCGAG GAGGGGTGTT ACGTCCCCAC CGTCAACGGC
TTCGTTTACG GCGCCTTCCA CGGTGAGGCG GTGAAGCAAA AGGTCTATCT GCCCGATTGG
CACAGCCGGG AGCGGGCGGA GTACACGAAC CTTCTCGCCG ACCTTCTGGC CGAGTGGCTC
CCCGCGGGGA TGACCGGCTC CATCTCCACC GTCCCCATCG GATTCAAGGC GGTCCTCTCC
CCCGCCGAGT ACCGGACCCG GGTACTGCAG GTCCTCAGGC ACCTGGACCG CCTGAAGGAG
GAGATGGGGG TCGACATCGT CCTCGCCCTG GAACCGGAGC CCGCCTGCGT GCTGGAGACG
ACGGAGGATC TGGTGCGTTT CGTGGAGGAG ATGGATCTTC CCGCGCCGCT TAGGGAGCGT
GTCGGGATCT GCCTTGATTG CTGCCATCTG GCGCAGCAGT TCGAGGAACC GGAATCGGCC
CTGTCGCTTC TGGCGGACAG CGGCATCAGG GTGGGGAAGG TGCAGGTCTC CTCCGCGCTC
TCCGCCGGGC ACAACGACCG CGCCGCGCTC TCTTTATTCG CCGAGCCGTG CTATCTGCAC
CAGGTGGTGA TCCGCGGCAA GGACGGCACG CTTGTCCGCT ACGACGACCT CCCCGCCGCC
ATCGAGCAGC ACCGGGGGGA GGGTGGGGAC GAGTGGCGCT GTCATTTTCA TGTGCCGGTA
TTCCTGCAGA AAGCCGGGAC CCTCGGCACC ACACGCGGTT TCGCGGAGAA GCTTTTGCCG
CTTCTGGACC GGGATGTGCT GTTGGAAGTC GAGACCTATA GCTGGGGGGT GCTGCCGCCG
CAACTGCGGT CGGAGGATCT TTCCTCGTCC ATCATCCGGG AGATCCAATG GCTGCAGGGG
AGCGTCGATG CGACGGACCG TCGTCCTTAA
|
|---|
| Protein sequence | MNSRIITYCS NIHPGESWEE TFRALREHVP KVKQAVSPDA RFPIGLRLSA RAARELLAAG
RASFASWLRE EGCYVPTVNG FVYGAFHGEA VKQKVYLPDW HSRERAEYTN LLADLLAEWL
PAGMTGSIST VPIGFKAVLS PAEYRTRVLQ VLRHLDRLKE EMGVDIVLAL EPEPACVLET
TEDLVRFVEE MDLPAPLRER VGICLDCCHL AQQFEEPESA LSLLADSGIR VGKVQVSSAL
SAGHNDRAAL SLFAEPCYLH QVVIRGKDGT LVRYDDLPAA IEQHRGEGGD EWRCHFHVPV
FLQKAGTLGT TRGFAEKLLP LLDRDVLLEV ETYSWGVLPP QLRSEDLSSS IIREIQWLQG
SVDATDRRP
|
|---|
| |