| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2356 |
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| Symbol | |
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| ID | 8137697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2741109 |
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| End bp | 2741636 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644869971 |
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| Product | conjugal transfer protein TraF |
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| Protein accession | YP_003022162 |
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| Protein GI | 253700973 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 123 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTATAC ATGTACGGGA TGAGAGGGCG CTCAGGAAAG TGGTGGCAGT CCTCCTTCTC
CTGGGAGCGT TGCAAGGTCT CAATGCCCAC TTTCGCGGAG AGTTTTGGCT GAACCTGACC
GACAGCGAGC CCATAGGGCT GTATCGCGTC CACCAGGTGG ACCGGGAGAT CCGGCGCGGG
GAGATGATCG TGATGGAGGT TCCGTCGGAG TTCCGGCCCT ACGTCTATGG CCGGGGATGG
CTCCCGGAGG GGTGGGCGCT GTTTAAACAC GTGGGCGCCG TGGCCGGTGA CGTCTACTGC
GTTGTGGAGT CTTGGCTGAT CGTGAACGGT AAACCGGTGG GACCCGTGTA TCTGGTCGAC
GAGGAGGGAC GTCCGCTGCC GCAGCTGAAG GGTTGCAAAG AAATACCGGA GGGATACTTC
CTTCCGGTCG CCACCAGGAT TCCGCGCTCT TTCGACGGAC GCTACATGGG GCCGGTGCAC
CTCGCGCTGA TCCAGGGTGT GGCTAGGCCG ATACTGACTT TGGAATAG
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| Protein sequence | MAIHVRDERA LRKVVAVLLL LGALQGLNAH FRGEFWLNLT DSEPIGLYRV HQVDREIRRG
EMIVMEVPSE FRPYVYGRGW LPEGWALFKH VGAVAGDVYC VVESWLIVNG KPVGPVYLVD
EEGRPLPQLK GCKEIPEGYF LPVATRIPRS FDGRYMGPVH LALIQGVARP ILTLE
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