| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2352 |
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| Symbol | |
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| ID | 8137693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2733644 |
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| End bp | 2735662 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644869967 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003022158 |
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| Protein GI | 253700969 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 101 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAA ACAACTATCA GGGATACGAG GTGCAGAAGC ACCGCCTGAC GATGACCGTG
AAGATGTTGT TCCAGATTTC CGCCGCCTGC CTGGCCCTGC AGGCGCTCTT TTTCCTCCTG
GCTTTTAAGA TCCCGCGCTA TTCCGTTACC CGGACCACAT CTTCCGACCA TTCCGCCTCC
TGGGTGATCA GGCGCGTCGA GCGGGTGCCC GGGGTGTACC GGGAATTCCT GTGGAAGTAC
CCTCTGGCCC ACCTGGCGCG GTCGTTCCGG CTCGACCCAA CCTTTCACAT CTACGCCCCC
CGCCGGCTGG CGGGGTGGCC GCACGACGCG CAGGGCTACG TCGCCATGCG GGCCCATGAC
CTAGTTCAAA ACGTCCTCTA TGGGGAGGTC CTGAAGGCCT ACCGCTTCCC CTTAGCCTTC
TCTTTTTTAA GCTGGGTCTG CGTTTGGCCT ATGGCCATTC GCTACGTGCG ACGCGTCACC
GCGCGCATCA AGGACCAGGA GCATATCCGG GGCGCCCGGC TCATCACCGA GAAAGAGATC
CACTCCGAAT CGGACGGGAC GGGGATCCTA CCGGTCGCCT CGATCCGCAT CCCCGAAGAC
CTTTCCAGAC GCCATATCCT CATCGCCGGT CAGACCGGCT CCGGGAAGTC CACCGTGCTG
ATCCAGCACC TGGCGGCGAT CCAAAATGCC ACACGCCGGG CCATCGCCAA CGACTTCAAG
GGAGAGCTGG TGGAGCGGTT TTACCGCCCG GAAAAGGACC TGATCCTCAA CCCCATCGAC
GCCCGTGGGG TGGGATGGAC CCTCTTCAAC GAACTCAAAT CGAAGCCGGA TCTGACCGCC
GTCACCGGCT CTTTGATCCC TCCCGCCAAA GGGGAGGACC GCTTCTGGAG CGCAGCGGCC
CAGGACGTCC TGCGCGGGGT GATGGCTTAC TGCTACGAGA CCAACAAGCG GACCAACGCC
GAGCTCTGGA AGGCGCTCAC CTCCAAGCTG CACGAGATAA CCGAGATGTG TCAGGCCACC
GAGTCAGGAC ACGCCGGGTA CACCTACATC CAGGACGCAA GTTCCAAACA GGCGGCCGGC
GTCATCGCCG TCTTGATGTC CTACGTCTCC TGGCTGGAGT TCGCCTTTGA CGGTCCTTTC
TCGCTTCGGC GATGGGCGGA AGAGGCGGGG GACAAGATGG TATTCATCAC CAACACCGAT
GAGGTCGCGA ACATCATGCG ACCCTACCTC TCCCTCTTCG CGGACCTCGC CGGGAAGAGG
TTTCTGACCC TGCCGGAGAG TACCGAACCT GAGAAAAACA TCTACCTGAT TCTGGACGAG
CTGGGGAACA TGCAGCGCCT GCCCAGCGTG AAACGCCTGC TCACGGCGGG GCGCTCCAAG
GGGATCGTAG TCGAAGTGGG CATCCCGGAT TTCACCAGCA TCGAGAGCGT GTACGGCCGC
GAGGACGCCC ACACCATCAT CAATTCCTGC GGCTCAAAGC TGATCCTCAA CCTCGGTGAT
CCGGAGGCCG CGCGGTTTTT CTCAGATCTC GCCAGCGAGG AGGAATGCTG GGAGTCCTCC
ACTTACTATT CCATCTCCGA GCACGATCAC CGCGGCGGGG AGAACCACAA CAGACAGGTC
AGGACCAGGA AGGTGATCAT GCCCGCAGAG ATCATGCGCC TAGCGGTCGG CAGCGGGTAC
TTCATGCTGC CGGGAGGAAA CCCGGCGCAG GTGGAAATCC CCTGGAGCGA GGCCAACAAA
CTGCCGGTCG TGCACAAGCC CTTTATCCTG CGTCCCGGTC TTTCGCTGGA CGAACTGGAG
GCCAAGGACC AGGAGGTCTC CATCATGGCC CAGAAGGTGT TGAATGGTCC GGCACCGGAG
GAACTGAAGG TCCAGGTTGC CCATAATGCC GCCAGCGGCG TGCGCCCCCC CTTGAACGTG
GAGGAGACCT CCAGCGATCG GGAGCAGATC TCGGTCCGGC CTGAGAACGT CCTCAACACG
GCGACGGTGG AGGCCGACCT TTCGGAGGAA ACGCCATGA
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| Protein sequence | MDKNNYQGYE VQKHRLTMTV KMLFQISAAC LALQALFFLL AFKIPRYSVT RTTSSDHSAS
WVIRRVERVP GVYREFLWKY PLAHLARSFR LDPTFHIYAP RRLAGWPHDA QGYVAMRAHD
LVQNVLYGEV LKAYRFPLAF SFLSWVCVWP MAIRYVRRVT ARIKDQEHIR GARLITEKEI
HSESDGTGIL PVASIRIPED LSRRHILIAG QTGSGKSTVL IQHLAAIQNA TRRAIANDFK
GELVERFYRP EKDLILNPID ARGVGWTLFN ELKSKPDLTA VTGSLIPPAK GEDRFWSAAA
QDVLRGVMAY CYETNKRTNA ELWKALTSKL HEITEMCQAT ESGHAGYTYI QDASSKQAAG
VIAVLMSYVS WLEFAFDGPF SLRRWAEEAG DKMVFITNTD EVANIMRPYL SLFADLAGKR
FLTLPESTEP EKNIYLILDE LGNMQRLPSV KRLLTAGRSK GIVVEVGIPD FTSIESVYGR
EDAHTIINSC GSKLILNLGD PEAARFFSDL ASEEECWESS TYYSISEHDH RGGENHNRQV
RTRKVIMPAE IMRLAVGSGY FMLPGGNPAQ VEIPWSEANK LPVVHKPFIL RPGLSLDELE
AKDQEVSIMA QKVLNGPAPE ELKVQVAHNA ASGVRPPLNV EETSSDREQI SVRPENVLNT
ATVEADLSEE TP
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