| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2068 |
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| Symbol | |
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| ID | 8137404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2396617 |
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| End bp | 2398875 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644869683 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003021878 |
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| Protein GI | 253700689 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0000000000000882027 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGAGCC GCCTCGAAGT AAAGATCATC GTCTCCCTCG CCCTCATCCT GACCTTGCTC
ATCGCCGTTT ACGGCTGGTG GATCGGCAGC CGGCAGACCT CTGTCTACAT TCAGACCCTC
TCCGACAACC TGCGCATCCT CTCCCGCAGC AACGCCGACC ACGCGGCAAA TTTCATGGTG
ATAAAGGAAT ACGCCGGGTT GGAAGCGCAC ATGCTGGACA GCGCCAACCT CCCCGAGGTG
GTCAACATCC AGGTCGCCGA ACAGGATGGG AACCTTCTGT GCAACATCGA TCGTCCCAAC
CGCGCCGAGC TGCCCAAGGT GAACTACAAC GTCAAATGGG TCAGGGTGCC GCAGGGGTCC
CAACCCGTTC TTAAACGCGA GGGACACCAA CTGGTGAGCT GGTGTCCCAT CGTCGCCGGC
GAACAGCTTG GCTGGGTAAA AATCGTCCTG AGCCTGGATA CGGCGCAGCG CCTCCTGCAG
GCCACCTGGC GCAGCACGCT TGTCATCGGC TTGCTCTGGA TCATCGTGGG AACCGTCCTG
ATGGCCATGG TGGTCAAGCC GCCGCTTCGG GCGGTCCGGG AACTGAGCCG CTTCGCGGAC
GAGCTGCAAA ACCGGAAGGG AGCGCAGGTC TCGGTGCCGC GCGGTGTGTA CGAAATCGAC
ATGCTGGCGG ATGCCCTGAA TCATTCGTCT AGAGAACTCC TGCTGGCCGA GCAGCGCCTG
TTAGCGGAAC AGGAACGCCT CTCCGTAACG CTGCAATCCA TCGGCGACGG CGTCATCGCC
ACCGATACCG AGAGCAGAAT TGTGCTGGTC AACCACGTTG CCGAGCTTAT GACAGGCTGG
ACCGAGAAAC AGGCCACAGG CGTAGGCCTG GACCAGGTTC TTTGCATCGA GCCAAGCGAC
TCCCTCCCGG ACGTCCGGGA AGCGCTTCAG GCGGTGATGG AGCGAAGGCA GACCATAGAA
CTCCCCGACC TGCACCGGGT GTGGTCCCGG GACGGCGTCT CCCGCACGGT AACCGTGATC
GGCGCTCCCA TCATAGACAG CGCGGCCCGG CTGGCAGGTA TGGTGCTAGT GATCCGCGAC
CTGACGGAGA AGGCGAAGAT GGAGGCCGAG AAGACGGGGC TTGCCGAGCA ACTGCTCCAG
TCGCAGAAGA TGGAGGCGGT AGGCAAGCTG GCCGGAGGGG TGGCGCATGA TTTCAACAAC
ATGCTGGGAG TCATCATAGG CAATGCCGAG CTGGCCATGA TGGGTGTCGA GCCTTCGGGG
AAACTCCACG ACCGGCTGCA GGGGATCCTC GATGCCGCCA ACCGCTCCGC CGAGATCACC
CGCCAGTTGC TGGCTTTCTC AAGGCAGCAG CACGCAGAGC CCAAGGTACT CGATCTGAAC
GTAGTTATCG GCAAGATGCT GAAGATGCTG CACAGGCTGA TTGGCGAGGA TATCGAAGTC
GTCTGGTCGC CGGGACAAGA CATCTGGAAA GTGAAACTGG ATCCGAGCCA GTTGGACCAG
ATCATGGCCA ACCTCTGCGT CAACGCCAGG GACGCCATCG CAGGAATCGG GAGAATGGAC
ATCCGGACGG AGAACGTCGA ATTGTCCCCT GAGAAACGAG GCCCTGCGGA GATGCCCCAG
GGAAGGTGCG TGATGCTGGA GGTGAGCGAC AGCGGCTGCG GCATGAGGCG CGAGGTGATG
GAAAGGATCT TCGAACCCTT CTATACGACA AAGGAAGTCG GGCGCGGAAC CGGGCTGGGA
CTGGCGACCG TTTTCGGCAT CGTCAAGCAA AACGACGGGC ACATCGAGGT GCGGAGCGAG
CCCGGGGCCG GTACCAGCTT CAGGCTCTAT TTCCCTGCGG TTGAGGGGGA AGCTCAGGAC
CACAAGAAAG GGAGCGTCGC GGCGATCAGG GGGAACGAGA CCATACTCGT CGTGGAGGAC
GAGCCGTCGA TCAATGCGCT CGCCACCACC ATGCTGTCGG AGTTGGGGTA CAGGGTTTTT
TCAGCGGGGA CACCTGGCGA GGCAGTTAAG GTGGCGGACG GCGGCCAGGT GAAGATAGAC
CTGTTGCTGA CGGATATAAT CATGCCTGAT ATGAACGGGC GCGACTTGTC CGAGTTGCTG
CACCGGTCGC ATCCCGACAT GAAGTGCCTG TTCATGTCGG GGTATACCTC GGACATCATA
TCGGAGCGTG GCAACATAGG GCGGGAGGTC TGTTTTCTGC AAAAGCCCTT CACCACCCAG
ACGTTGGCGG CGAAGGTCAG AGAGGCGCTG CAGGCCTAG
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| Protein sequence | MTSRLEVKII VSLALILTLL IAVYGWWIGS RQTSVYIQTL SDNLRILSRS NADHAANFMV
IKEYAGLEAH MLDSANLPEV VNIQVAEQDG NLLCNIDRPN RAELPKVNYN VKWVRVPQGS
QPVLKREGHQ LVSWCPIVAG EQLGWVKIVL SLDTAQRLLQ ATWRSTLVIG LLWIIVGTVL
MAMVVKPPLR AVRELSRFAD ELQNRKGAQV SVPRGVYEID MLADALNHSS RELLLAEQRL
LAEQERLSVT LQSIGDGVIA TDTESRIVLV NHVAELMTGW TEKQATGVGL DQVLCIEPSD
SLPDVREALQ AVMERRQTIE LPDLHRVWSR DGVSRTVTVI GAPIIDSAAR LAGMVLVIRD
LTEKAKMEAE KTGLAEQLLQ SQKMEAVGKL AGGVAHDFNN MLGVIIGNAE LAMMGVEPSG
KLHDRLQGIL DAANRSAEIT RQLLAFSRQQ HAEPKVLDLN VVIGKMLKML HRLIGEDIEV
VWSPGQDIWK VKLDPSQLDQ IMANLCVNAR DAIAGIGRMD IRTENVELSP EKRGPAEMPQ
GRCVMLEVSD SGCGMRREVM ERIFEPFYTT KEVGRGTGLG LATVFGIVKQ NDGHIEVRSE
PGAGTSFRLY FPAVEGEAQD HKKGSVAAIR GNETILVVED EPSINALATT MLSELGYRVF
SAGTPGEAVK VADGGQVKID LLLTDIIMPD MNGRDLSELL HRSHPDMKCL FMSGYTSDII
SERGNIGREV CFLQKPFTTQ TLAAKVREAL QA
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