| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1936 |
|---|
| Symbol | |
|---|
| ID | 8137270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 2246922 |
|---|
| End bp | 2248274 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644869550 |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_003021747 |
|---|
| Protein GI | 253700558 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 104 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAT GTGTGGTCGG ATCAGGCTAC GTGGGTCTCG TAGCCGGCAC CTGTTTTGCC
GAAAGCGGTA ACGACGTCAT CTGTGTCGAC GTCGACAAGG ACAAGATAGA CGGTCTGAAG
CGCGGCGTCA TTCCCATCTA CGAGCCCGGC CTGAAGGAAA TGGTCTTAAG GAACTGCGAG
GAGGGGAGGC TCAACTTCAC CACCGACCTC GACCTGGCCG TCAAGGAGTC GCTGGTTTGC
TTCATCGCGG TCGGCACCCC CCCCGGCGCC GACGGCTCCG CCGACCTGCA GTACGTCCTC
TCCGTCGCCC GCTCCATCGG CCGCGCCATG GAGAGCTTCA AGATCATCGT CGACAAGTCC
ACCGTCCCGG TCGGGACAGC CGACAAGGTG CGCGCCGCCG TGAACGAGGA GCTCGCCAAG
CGCGGGACGC ATATAGAATT CGACGTGGTG TCCAACCCCG AGTTTTTAAA GGAAGGGGCC
GCCATCGACG ACTTCATGAA ACCCGACCGC GTCGTCATCG GTACCGACAA CGTGAGGACC
GCCGAGATTA TGAAGGAGCT CTACTCGGCC TTCATGCGCA AGTCCAACCG CCTGCTGGTG
ATGGACATCA GAAGCGCCGA GATGACCAAG TACGCCGCCA ACGCCATGCT CGCCACCCGC
ATCACGTTCA TGAACCAGAT CGCGAACCTC TGCGAGATGG TGGGCGCGGA CGTCATGGCG
GTTCGGGAGG GGATCGGCTC CGACTCCCGC ATCGGTTACG ACTTCCTCTT CCCCGGCGTC
GGCTACGGCG GCTCCTGCTT CCCCAAGGAC GTCAAGGCCC TGGTGAAGAC GGCGGACGAG
TGCAGCTACG ACTTCGTCCT TTTGAAGGCG GTGGAGACCG CCAATGAACG GCAAAAGGCG
ATCCTCTCCG ACAAGATACT GCGCCGTCTG GGAAGCGCAG GCGACAAGCC TCTGGCCGGC
AAGCGCTTCG CCATCTGGGG ATTGTCCTTC AAGCCCCGCA CCGACGACAT GAGAGACGCC
CCTTCGCTCA CCATCATCAA CAGGCTTTTG GAAATGGGAG CGAGCGTGCA CGCCCACGAC
CCCGAGGCGA TGAACGAGGC GAAGAAGCAT TTCGGCGACC GCATCAGCTA CAGCGTGAAC
AAGTACGACC TGATGAGAGG GGCCGATGCG CTCGTCGTCA TCACCGAGTG GAACGAGTAC
AGGAACCCCG ATTTCGACCG CATCAAGGAG CTCCTGATCA ACCCGATCAT CTTCGACGGC
CGGAACCTCT ACCACCCTGG CCGCATGAAG GAGGCCGGGT TCGAGTACCT CCCCATCGGC
CGAAACGGCG AGGCCGTCTG CGAAATGGAC TAA
|
|---|
| Protein sequence | MKVCVVGSGY VGLVAGTCFA ESGNDVICVD VDKDKIDGLK RGVIPIYEPG LKEMVLRNCE
EGRLNFTTDL DLAVKESLVC FIAVGTPPGA DGSADLQYVL SVARSIGRAM ESFKIIVDKS
TVPVGTADKV RAAVNEELAK RGTHIEFDVV SNPEFLKEGA AIDDFMKPDR VVIGTDNVRT
AEIMKELYSA FMRKSNRLLV MDIRSAEMTK YAANAMLATR ITFMNQIANL CEMVGADVMA
VREGIGSDSR IGYDFLFPGV GYGGSCFPKD VKALVKTADE CSYDFVLLKA VETANERQKA
ILSDKILRRL GSAGDKPLAG KRFAIWGLSF KPRTDDMRDA PSLTIINRLL EMGASVHAHD
PEAMNEAKKH FGDRISYSVN KYDLMRGADA LVVITEWNEY RNPDFDRIKE LLINPIIFDG
RNLYHPGRMK EAGFEYLPIG RNGEAVCEMD
|
|---|
| |