| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1874 |
|---|
| Symbol | |
|---|
| ID | 8137205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 2180211 |
|---|
| End bp | 2180645 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644869485 |
|---|
| Product | Protein-tyrosine phosphatase, low molecular weight |
|---|
| Protein accession | YP_003021685 |
|---|
| Protein GI | 253700496 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | [TIGR02691] arsenate reductase (thioredoxin) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 107 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAA CAATCAGGGT ACTGTTCGTA TGCATACATA ACAGCGCCAG AAGCCAGATG
GGCGAGGCCT TTCTGAAACA AGCCGGCGGG GAACGGTTCG AGGTGCAAAG CGCGGGAATA
GAGCCTGGAA GACTCAATCC TCTCGTGGCG CAGGCCATGC TGGAAGTCGG CATCGATATC
TCCCGCAATA AGACCAAGCA GGTTTCCGAG TTCATCGAAC GGGGCGTCCT CTTCGATTAC
GTCATCACCG TCTGCGACGA AACCAGCGCC GAGCGGTGTC CGATATTTCC CGGGAAGGCC
ATGAGGCTCC ACTGGGGCTT TCCGGATCCC TCGGCTCTGC AGGGGACAGA TGAAGACAAA
CTGCGGGCGA TCCGCGCAAT CAGAGACGAC ATCAAAAAGA AGGTGGAAAG CTGGATCACC
TCCCTGGCCG CATAG
|
|---|
| Protein sequence | MEETIRVLFV CIHNSARSQM GEAFLKQAGG ERFEVQSAGI EPGRLNPLVA QAMLEVGIDI
SRNKTKQVSE FIERGVLFDY VITVCDETSA ERCPIFPGKA MRLHWGFPDP SALQGTDEDK
LRAIRAIRDD IKKKVESWIT SLAA
|
|---|
| |