| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1692 |
|---|
| Symbol | |
|---|
| ID | 8137023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 1972878 |
|---|
| End bp | 1974755 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644869304 |
|---|
| Product | putative methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003021504 |
|---|
| Protein GI | 253700315 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.179223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATC CTGCGGAAAA AGAAGTTGTT CATACACTTT TGAATGCGTA CCGGCGCTCT
TCAAAGCGCA AATCCCCCTT CTTCCTGATA GCGCGGATAG GTTCCGGCTA CGCCGCTATG
GCAGCCTTCA CCATTTTGGC GCTCTTTTTT TCGGCGCTCA ATCTCTCTGC GATCTACAAG
ACCGCGCGAG AAATCACCTA TGCAGACCTT CCCGCCATCA GCGCACTGAT AAAGCTGCGC
GCATCGCTGC AAGCGCAGGA GCGTTACGCG GGGAAATACG CCATCCTCAA AGACCCCGCT
TTCATCGACC TTTTCCATAC TCGCGAGAGG GAGTTCGCGG CCAATCTGAG GATACTGGAA
CAGACAGGGC AGGTAGACGA CCTGGCTCAA TTGACAAGAA ACTACCAAAC TTACCAGCAG
GCGGCGCAAA GGCTTCTAGG AGATCATCCC GCAGACCCGG CCTTGCGTCG CGCATCCGCA
ACCCAGCTCT TCGATTCGAT AAACAGCGTG TACGTGAAGC GCCAGGCGAA TCTGCATGAC
GTGATAGAAC ACGCCGAACT TCAGCGAAAG TCAGCGATCA GGTGGACCAT CATAATTGCC
TGCTCAGGCT TCTTGCTGAC CGCCTGGATT GCCCCCTGGG TCACAAACCG GATCTTCCGG
GCTACCAGGA AGTTGCAGAT GGCTACCCAC CGCGCTCTGA CTGGTGATTT CTCTTTTCCT
CCACAAATAC AGGCGAACGA TGAAATTCTC GATCTGGCTG ACGATGTCAC CACCATGACC
AAAAAGCTTG CGGAACTCGA AGACCTGAAC TTCGGGCCGA AGCAGCATGC CGGAGACCTG
ACAATAGAAA TGTTCATTGA AGAACAGGTG CAAAGGGGAA CGGGGTGTGC CTTGTGCGAT
GTACGAATGA ACGCGTTGGA TGTTGTGGTG GCCCAGCATG GATTCCGCAA GGCCGCTGAT
TTGCTGCACC TGACCGGCAA CCTGCTCCGC CGCGCGGCCA TCGAGCACGG TTGCGCCGAT
GGTTTCCTTG GGCATGTCGG GGGTGACAGC TTCATGGTCG CAGTGCCGCC GGACAGGGTT
GAAGGCTTTT CCAAAAGGGT TATCGACAGC TTCGAGAGGG AGGTGCCGGC GGTGCTGAAT
CCCGGCGCGG CGGAAGATGC CGACCCATTG AGCCCCCACC GCCCCGCTTC GATCGCCACT
GTAACCATCT CAACCATACT TTGCGGTGCG GGTCAGGCGC CTGCTGCCGC GGAGATCGCC
AAGGCCATGG ACAGCTTCAA GGGCAAAAGG TCGGGGAATT CCTTTCGGAG CGGGTGGAAC
ATGGCGTCCT TCCCCTTTGT CGCCGTCGTG CTGGCCGCGA GTCTGCTAAG CGGCTGCGCC
ACGTTCCAGA GCCAGGAGGT AGGGCAGCCG GCAACGCCTC AACCTAAGAA ACGACCCCAG
CCTTCGACGG AGGCTTGGTC CTGGAGAAAG ATGATGGGGA GGCAGTTGGA CCAGGCGGTC
CGAGCTATCC AACGCAGAGA CGCGCAAGGC GCCGCAGGGA GGCTTAGAGC CATCGTCAAT
CAGCGCGATG TCCCTGGAGT GACGGACGAG GCGCTCTTTC GCCTTGCCCT GCTCTCGATG
AATCCGAGCA TGGAGAGACC TGGATCCGAG AGGGGGATTC AGTTGCTGAA GCGGCTAAAG
AGGGACTTCC CCAAGAGCAG TTGGAGCGTA CAAGCCGAGC CGCTGCTGGA ACTGATAGAC
GTGGCCGAGA ACCTGAAGGC CCAGAGCAGG AGCTTGTCGA ACGCCAACCA ATCGCTCGAG
ACCGAAAACA GGGATCTTGC CACCAAGCTG AAACAGTTGA AGCGACTGGA CTTGGAGCTA
GAACAGCGCA CACCGTAA
|
|---|
| Protein sequence | MVDPAEKEVV HTLLNAYRRS SKRKSPFFLI ARIGSGYAAM AAFTILALFF SALNLSAIYK
TAREITYADL PAISALIKLR ASLQAQERYA GKYAILKDPA FIDLFHTRER EFAANLRILE
QTGQVDDLAQ LTRNYQTYQQ AAQRLLGDHP ADPALRRASA TQLFDSINSV YVKRQANLHD
VIEHAELQRK SAIRWTIIIA CSGFLLTAWI APWVTNRIFR ATRKLQMATH RALTGDFSFP
PQIQANDEIL DLADDVTTMT KKLAELEDLN FGPKQHAGDL TIEMFIEEQV QRGTGCALCD
VRMNALDVVV AQHGFRKAAD LLHLTGNLLR RAAIEHGCAD GFLGHVGGDS FMVAVPPDRV
EGFSKRVIDS FEREVPAVLN PGAAEDADPL SPHRPASIAT VTISTILCGA GQAPAAAEIA
KAMDSFKGKR SGNSFRSGWN MASFPFVAVV LAASLLSGCA TFQSQEVGQP ATPQPKKRPQ
PSTEAWSWRK MMGRQLDQAV RAIQRRDAQG AAGRLRAIVN QRDVPGVTDE ALFRLALLSM
NPSMERPGSE RGIQLLKRLK RDFPKSSWSV QAEPLLELID VAENLKAQSR SLSNANQSLE
TENRDLATKL KQLKRLDLEL EQRTP
|
|---|
| |