| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1671 |
|---|
| Symbol | |
|---|
| ID | 8137002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 1941848 |
|---|
| End bp | 1945456 |
|---|
| Gene Length | 3609 bp |
|---|
| Protein Length | 1202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644869284 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003021484 |
|---|
| Protein GI | 253700295 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 162 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTT CCGCCGAAAA ATCTTCCGCA ACCGGATCGA GGGCGCCGGC ACAGTTGTCG
AGGCAGCCCT TCTTCGCGCC TGCCATCCAG AGGCAGATGA CGGTGAGTAA GCCCGGCGAC
AAGCTGGAGC AGGAAGCGGA CCGGATGGCG GACCGGGTGC TCCGGATGCC TTCTGCCGCG
CCGGCCGGGA AGGAGGAGCT GCGCCGCCAG CCTGACGACC GCCTGCAAAA GGCGCCGCTT
CCGGAAGGGA GCGTAAGCAG ACAGCCGGAA GATCGACTCC AGAAAAAGGA CGAGGAAAAA
CTTCAGAAAC AGGAAGAGAA GCTCCAGAAG GCAGCGACAC CGGAAGAGAT CGGCAAGGCT
GACGACAAGC TCCAGAAGGC TCCTGGACCG GGAGTTGATG AGAAGCTCCA GCGCGCCGAC
ACCGGCGGCG CCCCCGCGGT CGATGCGGGG ACCCAATCCG CGGAGAGAAG CGCCGCAGGC
GGCGAAGCGA TGTCGAACGA CATGCGCGGG TTCATGGAGC CTCGCTTTGG CGCGGACTTC
GGCGGCATCC GCCTGCACCG GGACGAAGAA GCGGCGCGCC TGGGAGAAAG CTTGCAGGCC
CGCGCCATTA CCTACCGAAA CCACGTCTTC TTCGCCCGCG ACCAGTACCA GCCCGGCACC
TCGGAAGGAA GGATGCTCCT CGCCCACGAA CTGGGGCACA CGGTGCAGCA GGACCAGGGC
CTCCTGCGAC AGGGGAATCC ACGGAAGCGT GAAGAGGAGA AGCCGGCGAC GCTCCAGCGG
GCCACCGCCC CTGCTGCCGC GGCGGCTCCG GCAAAAGAAG TCGTCACCAG CTCGCAGGTG
GTCGATCTCT CTACCGACAC CTTCGCCCCC TCGGAAAAGG TGAAGACCGA GATCGAGGCC
CAGAAGCACA AGGGGCTGGA AGTCCGCGTG GTGGTGAAGG GGTTGACCGG CGAAGGGCGG
GTCAAGGTCA GGGTGGACAG CAAGAAGAAT TTCGACTCGA TGGGCAAGGG AACCATGCCC
CTCTTGAACC CCTGGGCCGA CCAGATCGGC GGTCTGCACG TCAACTTCAC CATAACCAAC
AGCAAGATAA CCGGCGGCTA CGCCTCCCTG AAACCCAAGG GGGGAGACAC CAACGACTGG
CTGCAGGCGC TGCAGAAGAA CGCGGCGCTC TTGGGCGGGC TGGGGCTGAA GGTGGAAAAC
CTCCCCAAGC CGTTGAACAC GTTCGAGGCG GGGAAGCTGA CTCTCGGGGT CTCCAACCTG
AAGGTGGAGA TAGGCGGCTA CGTCGACGCC GTCTTCAACC TCGGCGTCGA AAACGTGGAG
AAGCCGAAGA TAGAGGCGAG CGCCGACATC AACGTCAAGG GGATGGTCAA GGGGCAGTTG
AAGCTGGACA ACACCAAGGG GGGACTGGCC GGCGAGGTGA TGCTCGGGGT CGATTACAAG
TCCTTCAGCG GCTCGGCGCT CGTCGCCTAC AAAGCGGACG GAACGGTCGA TATCGCAGGG
AAGGCCGGCT ACAACTCGGA CAAGCTTTCG GGGCAGGTCT CCTTCGTCTC GACCGACATG
GATAGCGCCA ACAAGTACGC GAAAGACGCC ATCGCCGCGG CGGGGGGGAA GGAAAACATC
CAGACCGCTG GGCCGCCCCC TCCGGTTCCA GCGCCGAAGC CGGGGAAAAA GCAGCGGGCC
CTGGCCGCGA CCGGGCAGCT CAGCTTCAAC CTCACCCAGT GGTTCGCCGG GACCGTTTTC
GTGGTCGTGG ACGGGCGGGG GCTTCTCACC GTAGTCAGCA AGATCACCCC TCCCGGCGAA
ATCAAGCTCT TCCCCGAGAA GAACTTCGAC CGGGAGATCA TCAAGTTCGA GGCGAAGGCC
TACTACGGAA TACCGGTTGT CGGCAACCTG AACCTCTTCG CCAACATAAG CCTGACGGCC
TTGGCGCGTC TCGGCCCCGC GAAGATCTAC AACATCGAGA TACTGGGGAC CTATTCGACC
GACCCGGAGG TCCAGAAGAT GATCCAGATC TCCGGTTCCA TCAACATCTC GGCCTACGGC
GGCCTGCGGC TGCGCGCCGA AGGGGGCGCC GGGATTGAAA TCGCCTCTCA CGACCTCAAG
TTCGGCGTCG GGGTGCAGGC GGACGTAGGG GTCAAGGCCT ACGCCGACGC CCGCCCCACG
GTCGGCTATC GCGACCCGGG CGTCTTCTAC ATCAGCGGCA CGCTGGACAT CGTGGCCCAG
CCGATGCTTG GGCTGGGAGG AGACTTCTTC ATCGCGCTGG AGACCCCGTG GTGGTCGCCT
CTCTCCGACG ACCGGTGGAC CTGGCCCCTC TTCTCCAAGG AATGGCCGCT GGGAGATCCC
ATCGGGATCA GCGCCCTGGT GAAGGAATAC GAGTTCGGTT CCGGGAAGGT GCCGGAGATC
GAGCTGAAAA AGCCGGAGTT CGACCCGTCC AAGTTCATGA CCAGCATGGT GGACGACAAG
CTTCCGAAGA AGGGAGGGGG CAAGGAAGGA GGAGCGGGAA CCTTCAAGGA TGACGGGACG
GTGCCGAAGC CGGAGGTCCC GCCCAAGAAG CCCCCCCCGA AGAAAGTGGA CACGAAGCCG
GCGAAAAAGG GAGCGCCACC ACCCGCGGGC AAGTCCGGGA AGCCCGACCC CAAGGGGGCG
AAGGAGCTGG AGACCGGGAA GATCTTCCAG GCGGCCTCGA AGCCGCTGGC GGCACTGAAG
ACGAAAGGCC CCTTCACGCG TGCGATGCTG AACCAGGAGT TGGGCGCCAT CAAGGCAAGC
GTCAAGGGAG TCGACTTCGA GATCCAGGCG AAGGGGGAGA ACTGGGTCGT GACTCCCAAG
GCCGGCGGGA AGAAGGCAAA GGGGATAGAT CTCAAGGGGA AGGACGTCGA CAAAGCAGGC
CTACCCGACG GCAAGAAGGA GGAGCGGACC CAAGCCCAGA TGAAAAAGGA CGAGGAGGCG
GCGATAAAAG AGGCGACCCC CCTTCTCGAC GACGAGGAGA AGGATAAGGC CGAGATCGAG
AAGGCGCTCC CCCCGATAAA GGCGAAGTAC AGGTTGACCG CGCTGGTCCT GATCGAGGCG
GTCGTGGACG AGGACGAGGT GGAGGACGCC ATCAGGGCGA CCATCAACCC GACCACGACC
GGTCCGAAGA AGAGGCGGCT GAAAAAGCAC AAGTCGCAGT ACGTCACGCG AAAAGGAGCC
AAGTATGTCC TCAAATCCGG CTTCGACACC AAGGAAGTAA TCCGGGACAA GTTCTACGCG
AAGGCGTTCC GGGGGGGCGT CTACATCTGG CGGGACGGCC AGGTAGCGGG GCCGCTCAAG
CACCCGACCA ACCCGAACCT CTACAAGTGG GTCCCCCCCA GCGGGCACAG GACCAAGAAG
CAGTGGTGGG ACAAGACGCT CAAATACAAG GAAAGCCCGA CCCTGGACCA TAAGGGCCAG
GCGGTAGTCG ACCACTGGAA CGAAAAAGGA AGGAAGACGG ATCACGAAGA TCGCCTCAAC
TATTTCAACC ACATCCCCGG CCTCGAGGTC GTACCCTATA GCGAAAACAG CTCCATGGGG
GCCGAGCTCG CCGCCAGCTA CATGAAAAAA GTGACCATCA AATTCCGTGG ACCAGGAGAC
CCCCCATGA
|
|---|
| Protein sequence | MKSSAEKSSA TGSRAPAQLS RQPFFAPAIQ RQMTVSKPGD KLEQEADRMA DRVLRMPSAA
PAGKEELRRQ PDDRLQKAPL PEGSVSRQPE DRLQKKDEEK LQKQEEKLQK AATPEEIGKA
DDKLQKAPGP GVDEKLQRAD TGGAPAVDAG TQSAERSAAG GEAMSNDMRG FMEPRFGADF
GGIRLHRDEE AARLGESLQA RAITYRNHVF FARDQYQPGT SEGRMLLAHE LGHTVQQDQG
LLRQGNPRKR EEEKPATLQR ATAPAAAAAP AKEVVTSSQV VDLSTDTFAP SEKVKTEIEA
QKHKGLEVRV VVKGLTGEGR VKVRVDSKKN FDSMGKGTMP LLNPWADQIG GLHVNFTITN
SKITGGYASL KPKGGDTNDW LQALQKNAAL LGGLGLKVEN LPKPLNTFEA GKLTLGVSNL
KVEIGGYVDA VFNLGVENVE KPKIEASADI NVKGMVKGQL KLDNTKGGLA GEVMLGVDYK
SFSGSALVAY KADGTVDIAG KAGYNSDKLS GQVSFVSTDM DSANKYAKDA IAAAGGKENI
QTAGPPPPVP APKPGKKQRA LAATGQLSFN LTQWFAGTVF VVVDGRGLLT VVSKITPPGE
IKLFPEKNFD REIIKFEAKA YYGIPVVGNL NLFANISLTA LARLGPAKIY NIEILGTYST
DPEVQKMIQI SGSINISAYG GLRLRAEGGA GIEIASHDLK FGVGVQADVG VKAYADARPT
VGYRDPGVFY ISGTLDIVAQ PMLGLGGDFF IALETPWWSP LSDDRWTWPL FSKEWPLGDP
IGISALVKEY EFGSGKVPEI ELKKPEFDPS KFMTSMVDDK LPKKGGGKEG GAGTFKDDGT
VPKPEVPPKK PPPKKVDTKP AKKGAPPPAG KSGKPDPKGA KELETGKIFQ AASKPLAALK
TKGPFTRAML NQELGAIKAS VKGVDFEIQA KGENWVVTPK AGGKKAKGID LKGKDVDKAG
LPDGKKEERT QAQMKKDEEA AIKEATPLLD DEEKDKAEIE KALPPIKAKY RLTALVLIEA
VVDEDEVEDA IRATINPTTT GPKKRRLKKH KSQYVTRKGA KYVLKSGFDT KEVIRDKFYA
KAFRGGVYIW RDGQVAGPLK HPTNPNLYKW VPPSGHRTKK QWWDKTLKYK ESPTLDHKGQ
AVVDHWNEKG RKTDHEDRLN YFNHIPGLEV VPYSENSSMG AELAASYMKK VTIKFRGPGD
PP
|
|---|
| |