Gene GM21_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1642 
Symbol 
ID8136973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1911928 
End bp1912770 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content59% 
IMG OID644869255 
Productphosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 
Protein accessionYP_003021455 
Protein GI253700266 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones202 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGAC ACTATTTGAC TATACTTCGC CCGGCTCAAT GGCTTAAAAA CCTCATGCTG 
TTCTTCCCGC TGTTCCTGGC AGGGCAGTTG TTGACGGCGG ACGCCGCGCA ACGCGGCATG
CTCGCTTTCG TCTGCTTCTG CCTTGTCTCC AGCGCCGGTT ATGTCTTCAA CGACCTGCTG
GACAGTAAAC GCGACGCGCT CCACCCCCAA AAGTCTCGCC GCCCCATCCC TTCGGGGGAG
ATCGGAATGG TCGGTGCCAT TGTATACGCA GCACTGCTCC TGTCGGGCGG GGTGGGGCTG
GTCCTTTATC TCCCGATGTC GGTCCGGTTT CTGCTGTTGT CCTACGTCGT CGTATCGCTC
TCCTATTCCC TTTTCTTCAA GTCGATGATC CTCGTCGATG TCTTTGCCAT CGCGGCCGGC
TTTCTCATCA GGCTTCATGC CGGCGGCGAG GTCTTTGCCG TTCCGATTTC TCCCTGGCTT
TTTGTGACGG TCTTTCTTCT TGCGATCTTT CTCTGCACCG GGAAAAGGCT GAGCGAGGCT
GATTTTTTGG GTGGCTTAGC CGGCGACCAC CGCGCAACTC TCTCCGGCTA CCCTCCGGGA
TTTCTCGCGG GCACCATGTA CATGACCGGT GCCGCGGTGC TGGTGACCTA CACCATGTAC
GTCGTCTTCC GGCCCCGGCT GATCTACACG GTGCCGCTTT GCCTGTTCGG CCTATTGCGC
TACATCATCC GGGTCACCAC GGGGGGAAAC GGTGATCCCA CCGAGTCCCT GCTGAAGGAC
TGGGTCCTGC TCAGCGTCGC CCTCACCTGG GCCGCCATGG TCGTTTGGAG CGTCTACCAG
TGA
 
Protein sequence
MTRHYLTILR PAQWLKNLML FFPLFLAGQL LTADAAQRGM LAFVCFCLVS SAGYVFNDLL 
DSKRDALHPQ KSRRPIPSGE IGMVGAIVYA ALLLSGGVGL VLYLPMSVRF LLLSYVVVSL
SYSLFFKSMI LVDVFAIAAG FLIRLHAGGE VFAVPISPWL FVTVFLLAIF LCTGKRLSEA
DFLGGLAGDH RATLSGYPPG FLAGTMYMTG AAVLVTYTMY VVFRPRLIYT VPLCLFGLLR
YIIRVTTGGN GDPTESLLKD WVLLSVALTW AAMVVWSVYQ