| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1431 |
|---|
| Symbol | |
|---|
| ID | 8136759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 1682321 |
|---|
| End bp | 1683388 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644869043 |
|---|
| Product | ribosome small subunit-dependent GTPase A |
|---|
| Protein accession | YP_003021246 |
|---|
| Protein GI | 253700057 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1162] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0000307488 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGC ATATCGAGTT GAATCAACTG GGCTGGAGCG ACTGGTTTGA GCAACAGGCG
GCAGATATGG CAATGGGCAG TATCGCCCGC GTTGCGGCTG TGGATCGCGA CCAGTTGTTG
CTCGTGAATG AGACGCATGC TTTCCGGGGG AGGGTGGCAG GTAGCTATCT GCACCGCCAT
CACCTCTCCC ATGAACTCCC CTGCGTGGGC GATTGGGTCT GCCTGGAGAA GGCGCCGGCC
GACGATGTTG CGGTGGTGCG TGGGCTTTTG GAGCGAAGGA CGCTGCTGCG CAGAAAGTCC
GCCGGTGACG CCATCGAGTA CCAGATGATA GCTGCCAATC TGGACTACGT GGTGATCGTT
CAGTCGTGCC ATTTTGATTT CAATGTGAAT CGGCTGGAGC GCTACCTCGT CATGGTGCTG
GATGGCGGGG CTGAGCCTTG CATTCTGCTC ACCAAGACGG ATTTGGTTGA TCCTGCTGTT
GTTGCTGCGC AGATGGCTGA AATACGTGCT GCCGGCATCA CCGCGCCGAT ACTGACGCTG
AGCAACATTA CGCGGGAGGG GGTGGATGAG CTGAACCGGC TGTTGATTCC CGGGAAAACT
TATTGCTTCG TCGGCTCGTC CGGGGTCGGC AAGAGCACGC TTATCAACCA GTTGATCGGC
CGGGAAAAGC TGGAGACCAA GGCCGTTAGC GGGAGCGGGG AAGGGCGGCA TACCACGGTA
CGGCGGGAGC TGATACGTCT GGACTCGGGC GCGCTCGTGA TCGACAACCC TGGTATGCGC
GAGTTCGGCA TCCTCGGCGC GGCGGAGGGG TTGGGCAGCA GCCATTCCGA CATCACTGCC
CTGTCATCCA TCTGCCGTTT TCGGGATTGC AGCCATACCG GCGAGCCCGG TTGCGCTGTC
GCTGAGGCCG TGCAATCCGG CGCAATAAGC AGGGAGCACC TGGAGAACTT TCTTAAACTC
ACCGAAGAGT CCGAATTCCA CCAGATGTCG TATGCGGAAA AGAGAAAGAA GGACCGCGAC
TTCGGCAAGT TCGTCAAGTC GGTGAAAAAG GACCTGAAGG TAAAGTAG
|
|---|
| Protein sequence | MDKHIELNQL GWSDWFEQQA ADMAMGSIAR VAAVDRDQLL LVNETHAFRG RVAGSYLHRH
HLSHELPCVG DWVCLEKAPA DDVAVVRGLL ERRTLLRRKS AGDAIEYQMI AANLDYVVIV
QSCHFDFNVN RLERYLVMVL DGGAEPCILL TKTDLVDPAV VAAQMAEIRA AGITAPILTL
SNITREGVDE LNRLLIPGKT YCFVGSSGVG KSTLINQLIG REKLETKAVS GSGEGRHTTV
RRELIRLDSG ALVIDNPGMR EFGILGAAEG LGSSHSDITA LSSICRFRDC SHTGEPGCAV
AEAVQSGAIS REHLENFLKL TEESEFHQMS YAEKRKKDRD FGKFVKSVKK DLKVK
|
|---|
| |