Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1402 |
Symbol | |
ID | 8136730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 1649013 |
End bp | 1649846 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644869016 |
Product | Silent information regulator protein Sir2 |
Protein accession | YP_003021219 |
Protein GI | 253700030 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.000472225 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCTCT CCAGGAGTTT CGAAGAGGCG GCGGAACTGG TGGCAAAGGC GCAGGCCTTG GTGGTGGCCG CCGGAGCGGG CATGGGGGTG GATTCGGGGC TGCCGGATTT TCGCGGCGAC CAAGGGTTCT GGAACGCGTA CCCGCTCTAC CACAGACTCG GCATCAGCTT CGTCGATGCG GCGAACCCGG AACATTTCGA GCGCGATCCC CGCTTCGGCT GGGGGTTCTA CGGCCACCGC ACCAACCTGT ACCGGGAAAC GGTCCCGCAC CGGGGCTTCC AACTGCTGCT CGATTGGGCC AGGCGTTATC GGCTCGACTG CTTCGTCGCC ACCTCCAACG TCGACGGCCA GTTTCAAAAG GCCGGTTTCG CCGCGGATGC CGTGCTCGAA TTCCACGGCT CCATCCATCA CCTCCAGTGC ACCAGGCCCT GCAGCAGCGC CATATGGGAG AACAGGGAAG AGTTCCGTAT CGACACGGAG ACCATGCGGG CCGACCATGT CCCGCTCTGC CCCCGCTGCG GTTCACCCGC GCGCCCCAAC ATCCTCATGT TCGGCGATTA CGGCTGGATC GGGGACCGCA CCCAGCGCCA GCAGGAGCGC TTCCGGCAGT TCCTCTCCCG GCAGGGGGAG GGGAGGGTCG TGGTGGTCGA GATGGGAGCC GGGACCGCCA TTCCCACCGT GCGCGCCGCC AGCGAACGGA TCGGCTCCCT GGCCCATGGC CGCGTCATCA GGATCAACCC GCGCGAGCCG CGGATCAAAG CGCCGCACCT CTCCCTTCCC TGCGGAGCCC TGGAGGGGCT TAAGGGGATC GAGGAGGTAC TCAGTCGCAG CTAA
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Protein sequence | MDLSRSFEEA AELVAKAQAL VVAAGAGMGV DSGLPDFRGD QGFWNAYPLY HRLGISFVDA ANPEHFERDP RFGWGFYGHR TNLYRETVPH RGFQLLLDWA RRYRLDCFVA TSNVDGQFQK AGFAADAVLE FHGSIHHLQC TRPCSSAIWE NREEFRIDTE TMRADHVPLC PRCGSPARPN ILMFGDYGWI GDRTQRQQER FRQFLSRQGE GRVVVVEMGA GTAIPTVRAA SERIGSLAHG RVIRINPREP RIKAPHLSLP CGALEGLKGI EEVLSRS
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