Gene GM21_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_1402 
Symbol 
ID8136730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp1649013 
End bp1649846 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID644869016 
ProductSilent information regulator protein Sir2 
Protein accessionYP_003021219 
Protein GI253700030 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.000472225 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCTCT CCAGGAGTTT CGAAGAGGCG GCGGAACTGG TGGCAAAGGC GCAGGCCTTG 
GTGGTGGCCG CCGGAGCGGG CATGGGGGTG GATTCGGGGC TGCCGGATTT TCGCGGCGAC
CAAGGGTTCT GGAACGCGTA CCCGCTCTAC CACAGACTCG GCATCAGCTT CGTCGATGCG
GCGAACCCGG AACATTTCGA GCGCGATCCC CGCTTCGGCT GGGGGTTCTA CGGCCACCGC
ACCAACCTGT ACCGGGAAAC GGTCCCGCAC CGGGGCTTCC AACTGCTGCT CGATTGGGCC
AGGCGTTATC GGCTCGACTG CTTCGTCGCC ACCTCCAACG TCGACGGCCA GTTTCAAAAG
GCCGGTTTCG CCGCGGATGC CGTGCTCGAA TTCCACGGCT CCATCCATCA CCTCCAGTGC
ACCAGGCCCT GCAGCAGCGC CATATGGGAG AACAGGGAAG AGTTCCGTAT CGACACGGAG
ACCATGCGGG CCGACCATGT CCCGCTCTGC CCCCGCTGCG GTTCACCCGC GCGCCCCAAC
ATCCTCATGT TCGGCGATTA CGGCTGGATC GGGGACCGCA CCCAGCGCCA GCAGGAGCGC
TTCCGGCAGT TCCTCTCCCG GCAGGGGGAG GGGAGGGTCG TGGTGGTCGA GATGGGAGCC
GGGACCGCCA TTCCCACCGT GCGCGCCGCC AGCGAACGGA TCGGCTCCCT GGCCCATGGC
CGCGTCATCA GGATCAACCC GCGCGAGCCG CGGATCAAAG CGCCGCACCT CTCCCTTCCC
TGCGGAGCCC TGGAGGGGCT TAAGGGGATC GAGGAGGTAC TCAGTCGCAG CTAA
 
Protein sequence
MDLSRSFEEA AELVAKAQAL VVAAGAGMGV DSGLPDFRGD QGFWNAYPLY HRLGISFVDA 
ANPEHFERDP RFGWGFYGHR TNLYRETVPH RGFQLLLDWA RRYRLDCFVA TSNVDGQFQK
AGFAADAVLE FHGSIHHLQC TRPCSSAIWE NREEFRIDTE TMRADHVPLC PRCGSPARPN
ILMFGDYGWI GDRTQRQQER FRQFLSRQGE GRVVVVEMGA GTAIPTVRAA SERIGSLAHG
RVIRINPREP RIKAPHLSLP CGALEGLKGI EEVLSRS