| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1368 |
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| Symbol | |
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| ID | 8136696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 1612778 |
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| End bp | 1614433 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644868982 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003021185 |
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| Protein GI | 253699996 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.00000126937 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGACG AGCTGACGCC GGAGCTGCGG GACGAACTAC CGAAGGCTCC AAAGGACATC
CCCGGGCTGG ATCCGAAGGC CACACTGTTG CTGCAGGATC TGCAGAGCAG GCTGGCGACG
GCCGAGGCCG AGAATGTACG GTTGCGCCGC GTCATCGAAT CCCAGCGCTG CGACGAGGAT
GGTTACCGCT TCCTCTACAA CGACACCCCG GTCATGCTGC ACTCCATCGA CCGCAACGGG
CTGCTCCTGG GAGTGAGCAA CTATTGGGTC GAGGTGCTGG GGTACCAGCG GGAGGAGGTG
ATCGGGCGCA AGTCGACCGA TTTCCTTACC GAGGAGTCGC GCCGCTACGC CGAAGAGGTC
GTCCTGCCCG AGTTCTTCCG CACCGGTTTT TGCCGCAACG TCCATTATCA GATGGTGAAA
AAGAGCGGGG AGCTCCTGGA CGTGCTTCTT GTCGCCTCCG CGGAGCGGGG ACCCCGGGGT
GAACTGCTGC GCTCCTTTGC CGTCATGACC GACGTGACAG AATGGAAGGC TGCGGAAAAG
GCTTTGAAGG AGAGCGAAGA GCGCTACCGC ATGATAGTAG AGACCTCCCA AGAGGGGATA
CTCGCGGTCG ATGCCGAGGG GCGCATAAGC TACGCCAACC GTCAGTTCGC CGAGATGCTG
GGGCTGGAGG TCGGCGAGGT CGGCGAGGTC GGCGAGGTCG TCGGGCGTTT TTTCCTTGAG
TTCGTCGACG GCTGCCTGCA CGACGATGTA GCCGTCAAGA TCAAGAACCG GGAAAATGGG
CTATCCGAGC ATTACGAGAC GATCTTGCTG CGCAAGGGGG GCTCCAGGAT GTGGGCCGGC
GTCTCCGCCA TTCCCGTAAA AGGCCCAAAC GGCGAGTTCT CCGGGGCGTT CGCCATGGTC
TCCGACATCA CCAAGCGCAA ACAGGCTGCC GAGGAGATCG AGGTGCTGCA CACACATCTT
TCGGCGCGCG CCTGCGAACT GGAGCTTGCC AACGAGGAGT TGGAGGCTTT CAGCTACACC
GTTTCCCACG ACCTCAGAAG GCCTCTCACC GCCATAAACG GCTTCAGCCA GGTGCTGCTC
GAGCTTTACG GATCCGGTAT GGACCCGCAG TGCAGGGAGT ACGTACGGGA GATCCTAAAC
GGCAGCATCA GGATGAACCA CCTGATCGAC ACGCTGATCA ACTTCTCGCG CCGAAGCGGA
GGAGAATCGG TCCGGGAAGA GGTGGAGATA ACCGAGCTGG TGGAGGAACT TTGCGCCGAA
CTGCAACGCA CCGAGCCTCA GCGCAACGTT TCCCTGCTCA TCCAGCCAGG CGTGCGCGGG
ATGGCCGACG CGCATCTTTT GCGGGTCGTC CTCGACAACC TGCTGGGGAA CGCCTGGAAG
TACTCCGCCA AAATGGAGTC AAGCGAGATC GCATTCGGCA CGGTCGATCA CCTGGGGAAG
ACGGCCTACT TCGTCCGGGA CAACGGCGCA GGTTTCGACA TGGCCCTGGG TGACCTGCTG
TTCAAGCCGT TCCAGCGCCT CCACGACGCC CGCGATTTCG AAGGGACCGG CATCGGCCTC
GCCAGCGTGC AGCGCATCAT TCAGCGGCAC GGGGGGCAGA TCTGGGCCGA GAGCGAACCC
GGCAAAGGGG CGACCTTCTA CTTCACCCTG GGCTAG
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| Protein sequence | MQDELTPELR DELPKAPKDI PGLDPKATLL LQDLQSRLAT AEAENVRLRR VIESQRCDED
GYRFLYNDTP VMLHSIDRNG LLLGVSNYWV EVLGYQREEV IGRKSTDFLT EESRRYAEEV
VLPEFFRTGF CRNVHYQMVK KSGELLDVLL VASAERGPRG ELLRSFAVMT DVTEWKAAEK
ALKESEERYR MIVETSQEGI LAVDAEGRIS YANRQFAEML GLEVGEVGEV GEVVGRFFLE
FVDGCLHDDV AVKIKNRENG LSEHYETILL RKGGSRMWAG VSAIPVKGPN GEFSGAFAMV
SDITKRKQAA EEIEVLHTHL SARACELELA NEELEAFSYT VSHDLRRPLT AINGFSQVLL
ELYGSGMDPQ CREYVREILN GSIRMNHLID TLINFSRRSG GESVREEVEI TELVEELCAE
LQRTEPQRNV SLLIQPGVRG MADAHLLRVV LDNLLGNAWK YSAKMESSEI AFGTVDHLGK
TAYFVRDNGA GFDMALGDLL FKPFQRLHDA RDFEGTGIGL ASVQRIIQRH GGQIWAESEP
GKGATFYFTL G
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