Gene GM21_1104 details

Gene Information

• Locus tag: GM21_1104
• ID: 8136426
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 1293707
• End bp: 1294354
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644868715
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_003020923
• Protein GI: 253699734
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 105
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCAAGA TCAAAACCAT CCTGATGAGC GACCAGATCC TGGTCCGCCA ATGCCTTTGG 
GTTCTCCTCG AAAAAGCGCC GGAGCTTGAT CTGGCCGCCC AGTTGGATTT CGCAGCCACT 
GAGCTTGAAG AGGTCCTTGA GCTGCATTCG GACCTGGTGA TCATCGATCC GGATTCCAGC 
GACATCGACG GCAGCGACAC CATTCGCAGC CTGGTAAGCG GCACTTTTCC AGCGAAGGCG 
CTGATATTGT CGGGCCGCGC CGAACCCAAG CGGGTGGCCG ATCTCCTCAA CGCCGGCGCC 
AGCGGCTTCG TCCCCAAAAG CTCCCCTGTC GATGAATTGC TGTGGGCGGT CAAGGCCGTA 
ACCGGCAACG GGTTCTATCT GCCACCGGAA CTGGATGCCG TGGTCAGGAG GAAAGGCTCA 
ACCTGGTCGG CTGCCCAGCC GCAACAGGTC ATTTTGACTC CGCGGGAGCA CGACATCATG 
GTGCTGCTGG CCCAGGGGAA GAGTTCGCGT GCCGTCAGCG AGCAACTGCT GATCAGCGTA 
AAGACGGTGG AGGCCCACCG CGCCCATATC ATGAAGAAAC TGGGGCTGTC CGGGATGGCG 
GCTCTTGCCA AATACGCCCT GCGCGCCGGC TTTATCCCCC TCGATTGA 

 

Protein sequence

MRKIKTILMS DQILVRQCLW VLLEKAPELD LAAQLDFAAT ELEEVLELHS DLVIIDPDSS 
DIDGSDTIRS LVSGTFPAKA LILSGRAEPK RVADLLNAGA SGFVPKSSPV DELLWAVKAV 
TGNGFYLPPE LDAVVRRKGS TWSAAQPQQV ILTPREHDIM VLLAQGKSSR AVSEQLLISV 
KTVEAHRAHI MKKLGLSGMA ALAKYALRAG FIPLD