| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0980 |
|---|
| Symbol | |
|---|
| ID | 8136301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 1158396 |
|---|
| End bp | 1159223 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644868594 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_003020803 |
|---|
| Protein GI | 253699614 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 0.297329 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTAC CGCTCAACAT CAAGCGCCTG TTGGCCAACC AACCGGTCGA TCTGCCGGTC
TTCCACCCAG TGGCGCTGAG GCTGCAGCAC CTCCTTGCGA CCCCGGACTT CTCGATGGCC
CAGGTAGTCA CACTGGCCAA CGAGGATCAG TCGCTGGCGG GACAGATCCT GAAGATGGCG
AACTCCCCCC TGTATATCGG GCGTTTCCGC ACCGAGACCA TCAAGGATGC TGTGATCAGG
CTGGGGGCGC AGCAGGTGTG CAACTTGGCG ATGGCGGCTT CGCAGGCGGG GCTCCATGTA
TCTGAAGACC GCGTCATCAA CACTTTCATG CAGCCGCTTT GGCTGCACAG CCATGCCTGC
GCCATGGGGA GCCGCTGGCT GGCCCGCAGC GCCGGCTATC CGCAGCACGC TGACCAGGCC
TATATGGCGG GCCTTTTACA CGATATCGGC AAGCTCTACC TGATGAAGGC CCTGGAGCGG
CTGAATAAGG CCGGTATGGC GCCGGCCCCG CTGGAGGGGT ACCTGCTGGA GATGTTCGAT
GAACTGCATG TGGAGCAGGG GTGCCGCCTG ATGGAGCACT GGAACATGCC GAAGGTGTAC
TACAACGTGG TGGCCAACCA TCACGACCAG AATTTCGATA CCACGGACAT CGTGCTGACG
GCGGTGCGGC TGGTCAACAA GGCATGCAAG CTGAAAGGGA TCGGGCTTAT CAGCGATCCG
ACCCTCGACC TCGAAACCGA GCCGGAAGCA TCCCTTTTGC AGTTGTCGCC GGAAGAGATG
GACGATCTGC TGGTGGTTCT GGACCAGTCA CAAGAGCTGT CGCTGTAA
|
|---|
| Protein sequence | MPLPLNIKRL LANQPVDLPV FHPVALRLQH LLATPDFSMA QVVTLANEDQ SLAGQILKMA
NSPLYIGRFR TETIKDAVIR LGAQQVCNLA MAASQAGLHV SEDRVINTFM QPLWLHSHAC
AMGSRWLARS AGYPQHADQA YMAGLLHDIG KLYLMKALER LNKAGMAPAP LEGYLLEMFD
ELHVEQGCRL MEHWNMPKVY YNVVANHHDQ NFDTTDIVLT AVRLVNKACK LKGIGLISDP
TLDLETEPEA SLLQLSPEEM DDLLVVLDQS QELSL
|
|---|
| |