Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0805 |
Symbol | |
ID | 8136121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 957837 |
End bp | 959138 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644868422 |
Product | integrase family protein |
Protein accession | YP_003020636 |
Protein GI | 253699447 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.00339873 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCAGAG CAAGAATCGT TTTCACCGAC ACCATGATTA GAAAGCTAAA GCCCGACACC AACGAATACC GCAAGAGTGA AGGCAACGGC TTCACCATAC GGGTCATGCC GTCGGGCTTC AAAAGCTGGC TGTACCTTTA CGCAATCAAT GGCAAACGTC GCTGCATGGG ACTGGGACAC TACCCGGATG TGACCCTGGA GACCGCACGC GACCGTTTTG AGGCCGCTAA GAAAATGGTC AAAAATGGCA TGGACCCTTT AGATGCCAAA GAAGAAGAGC AAGAGCAACA TCGGAAGGCA CTGACGGTCA AACAGCTGTT TGATGATTAT CTGGTCCGCC ACGCGAAGCT AAACAAGAGG GAGTCGTCCT GGCGGGAAGA CGAACGCCTG TTCAAAGTAA ATGTGGAGCC TGAATGGGGC AAGCGGAAAG CAGAGCACAT TAAAAAACGG GACTGCATTG AATTGCTCGA CAAATATGCC GACCGCCCCG CACTTTGCCA CAACGTGATG AAGCTTACCC GCAAGCTGTT TAACTTCGCA GTAGAAAAGG ATATTTTGGA ACACACACCG TTTACCGGCG TCAAGGTCCC GGTTGAACTG GAATCTCGCG AACGCATTCT GACAGATACC GAAATCAAAA AGCTGTGGAG AACCGAACTC CCAAAAGCGG CCATAAGCGA CGAGGTAAAG CAAATCATCA AGCTTCTCCT GTTGACCGGC CAGCGCGTCG GAGAGGTTTG TGGGATCACC GTAAACGAAG TGGACGGAAA TTGGTGGACC ATTCCGCAAG AGCGCTCTAA AAATGGGCAG ACACACAGAG TTTATCTTAC GGACACCGCA ATCAAACTCC TTGGCAAATC AATCAATGGC TACTACTTCC CCTCTCCGGT GGTTAAAAAC GATTCTGATG GGAAGCCAGT GTTCAAGCAT ATCGACGAAA ACGCTGTAGC TTACGCTATC CGAAAGAACC TGAAAGACTA CCAGCCCCGC CGTCCCATAA AAGGAGACCG CATCAGCATG GTTCAAGTCC CAGAGGAGAA AAAGATGAGC ATTGCTCATT TCACTCCTCA CGATTTGCGG AGAACATTTT CTACCAGCCT AGCTAAGCTC GGATTCAACG ACGAGATTAT AGATGCAGTG ATGGGTCACA AAAAACAGGG TGTTATCAAG ATTTACAATC GCCACAAGTA TGACACTGAA AAGCGTCAAG CGCTTGTAGC GTGGGAAAAG AGGCTGCTGA GCTTAACCAG CGACGAAGGG CAGGCAACTT CAGTAAAGAA GAAGAACAAA CGCGATAAGT AG
|
Protein sequence | MSRARIVFTD TMIRKLKPDT NEYRKSEGNG FTIRVMPSGF KSWLYLYAIN GKRRCMGLGH YPDVTLETAR DRFEAAKKMV KNGMDPLDAK EEEQEQHRKA LTVKQLFDDY LVRHAKLNKR ESSWREDERL FKVNVEPEWG KRKAEHIKKR DCIELLDKYA DRPALCHNVM KLTRKLFNFA VEKDILEHTP FTGVKVPVEL ESRERILTDT EIKKLWRTEL PKAAISDEVK QIIKLLLLTG QRVGEVCGIT VNEVDGNWWT IPQERSKNGQ THRVYLTDTA IKLLGKSING YYFPSPVVKN DSDGKPVFKH IDENAVAYAI RKNLKDYQPR RPIKGDRISM VQVPEEKKMS IAHFTPHDLR RTFSTSLAKL GFNDEIIDAV MGHKKQGVIK IYNRHKYDTE KRQALVAWEK RLLSLTSDEG QATSVKKKNK RDK
|
| |