Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0661 |
Symbol | |
ID | 8135976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 794125 |
End bp | 794958 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644868278 |
Product | extracellular solute-binding protein, family 1 |
Protein accession | YP_003020493 |
Protein GI | 253699304 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 4.81727e-24 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCATGG TAGAGAAACG GTTCATCCGC ATCGCGTTGA CCCTATGCCT GGCGTTTTTG GGGGGGCAGG CGGCATCGGC CCAGGAGATT GTCAGGATCA GCGGCACCGG AGCGGGATGC GCCCTGATGG TACCGCTCAT CGACGCTTTC GAGAAGGAGA ACAAGGGGAT CAAGGTCCAC ATGGAGAAAA GCCTGGGTAG CACGGCCTCC ATAAAGGCGA CGGCCAAGAA CGCGCTGGAC CTGGCCATCT CCGGCCGTCC CCTGAAACCG GCGGAGAGCG CCGAGGGGCT GGTCCAGCTC AATTACGGAA AGACGCCTTT CGTGCTGGTG AGCAACGCCC GCACCAGGGA GAGCAACCTG TCGCTGAAGC AGGTGGTCGG GATGTACTCC GGGAAGATCC CCAAGTGGCC CAACGGCGGC TTCGTCCGCG TGGTGCTGCG CCCCGACGAG GACACCGACA CCAAGATCAT CCGCGCCATC TCCCCCGACA TGGACATGGC CGTCACCGCC GCGCAGGCGC GCAAGGACAT GCTGCTCGGC ATCACCGACA ACGAGGCCTA CGAGGCGGTG TCCAAGGTCC CCGGCACGCT CGCCTTCATG GGGCTCACCC TCCCCCTGTC CCAGCCGGGG AGCGTCAAGG TCCTGCGCCT GGACGGCGCG CTGGGGAGCG TCGCAACCCT GGCCGGGGGG AAGTACCCCT ACGTCAAGCC GCTCTATCTG ATGACCCGGA AAGAGAGTTC CGCCGCGACG GAGAAGTTCG TGAAGTTCCT CTACTCTAAG AAGGGAAAGT CGATGGCAGT CAGGCACGGG CTGCTGCCGA CCGGGATTAA ATGA
|
Protein sequence | MSMVEKRFIR IALTLCLAFL GGQAASAQEI VRISGTGAGC ALMVPLIDAF EKENKGIKVH MEKSLGSTAS IKATAKNALD LAISGRPLKP AESAEGLVQL NYGKTPFVLV SNARTRESNL SLKQVVGMYS GKIPKWPNGG FVRVVLRPDE DTDTKIIRAI SPDMDMAVTA AQARKDMLLG ITDNEAYEAV SKVPGTLAFM GLTLPLSQPG SVKVLRLDGA LGSVATLAGG KYPYVKPLYL MTRKESSAAT EKFVKFLYSK KGKSMAVRHG LLPTGIK
|
| |