Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0647 |
Symbol | |
ID | 8135962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 778150 |
End bp | 778779 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644868264 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003020479 |
Protein GI | 253699290 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 5.9067299999999995e-25 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCGTCCA CCGAGTACCA TGCAGAAACC GGAGTGAGGA TCAAGAAGGC AAGGCTAGCA CTGGGGCTCA CCCAGAAGGA ATTCGCCGCC TCCCTGGGGA TCGTCCAAGG GTTTCTCAGC GGCATCGAAA CAGGCAGAAA GCGCCCCTCG GACACGCTGC TGATCGCACT CTCGCACACC TTCGGCATCA ACGCCCAGTG GCTGCATGAC GGAAGCGGGG AGAGCTTCAA AAACGAGCTG GCAGCGGACC AGCCCAAGGT CAGCCGCGCC CCGCTTCTGG ACGTGATACC GGACAGCTTC CCCGACGACC CCGGCGCCGT CAGCCGCTAT ATCTCGGTCC CCGACCTCCC CGAGGGGTGC TACGCCATCG TCTGCTACGG AGATTTCATG TCCCCCACCA TCCGTGACGG CGACGTGGTG ATCTTCAGGC CGGAGAGCGG ACAGAAGAAA AGCGGCGACA TCATCATCGT CCACAACCGC TGGGGGGAAC CGATCCTGAG AAGGTACCGC GTCAAGGACG ACGAGATCTA CCTCGCCCCC GACAACCCCG CTTACGCTCC CTTCCAGCCC GACGACGGCA CCCGCACCAT CGGCATCGTG GTGGATGTCT GGCGCAAGGT CATCATCTAA
|
Protein sequence | MPSTEYHAET GVRIKKARLA LGLTQKEFAA SLGIVQGFLS GIETGRKRPS DTLLIALSHT FGINAQWLHD GSGESFKNEL AADQPKVSRA PLLDVIPDSF PDDPGAVSRY ISVPDLPEGC YAIVCYGDFM SPTIRDGDVV IFRPESGQKK SGDIIIVHNR WGEPILRRYR VKDDEIYLAP DNPAYAPFQP DDGTRTIGIV VDVWRKVII
|
| |