| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0608 |
|---|
| Symbol | |
|---|
| ID | 8135923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 737478 |
|---|
| End bp | 739040 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644868225 |
|---|
| Product | general secretory pathway protein E |
|---|
| Protein accession | YP_003020440 |
|---|
| Protein GI | 253699251 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0000000000000611826 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA GCTTAGACAT AGAAGAGATA GCGACACGGC TCGGCCTTCC CTACCAGGCC
GAGATCGACG ACTCCAAGGT AGACGGGGCG CTGGTGAACC GGGTCCCGCT CAACTTCGCC
CGCAACAACC TCCTGCTCCC GCTGCACGAG GAGGACGGCT CCATCGTCGC CGCCAGCGCC
GACCCGACGA ACCTCCTGGC GCTGGACGAG ATGGCCGGAC TCTTCTCGCA ACCGGTCTCC
GTGGTCGCGG TCCCGCGCCC GGCTCTCCTG GACGCGGTGA ACCGCCTCTA CTCCCGCCTC
TCCGGTTCCG CCCAGGAGGT GGTCGAGGAA CTCGAAGGGG AAGAGCTCTC AACACTCGCC
ACCACCTTCA ACGAGCCGCG CGACCTTATG GAGCTGACCG ACGAGGCGCC GGTGATCCGG
CTCTTGAACT CCATCCTGTT TCAGGCCGTG AAGGAGCGCG CGAGCGACAT CCACATCGAG
CCGTTCGAGC GCGAGCTCGA GGTCCGCTTC CGGATCGACG GCCTTTTGTA CAAGATGCTC
TCCCCCCCCA AGGTGATCCA GGAGGCGCTC ACCTCCCGCG TCAAGATCAT GTCCGGGCTC
AACATCGCCG AGAAGAGGCT GCCGCAGGAC GGGCGCATCA GGGTCAAGGT GGCCGGACGC
GACGTCGACA TCCGCGTGTC GCTCATCCCC ACCTTCTTCG GGGAGCGCGT GGTATTGAGG
CTTTTGGACA AGCAGCGCGG CGTCCTCTCC CTCAAAGAGA TCGGGCTCTC CGACGGCAAC
GACCGGCTGA TGGACCGGCT TTTGTCGAGG ACGAGCGGCA TCATCCTGGT CACGGGACCT
ACCGGCAGCG GCAAGACCAC CACGCTCTAC GCGGCACTTT CCCAGATCAA CTCGCCGGAG
AAGAACATCA TCACCGTCGA GGACCCGATC GAGTACCAGT TGAAGGGTGT GGGGCAGATA
CAGGTCAACC CGAAGATCGA CCTCACCTTC GCCGCGGGGC TTCGCTCCAT CCTGAGGCAG
GACCCGGACA TCGTCATGAT CGGTGAGATC CGCGACGCCG AGACCGCCGA GATCGCCATG
CAGGCCTCGC TCACCGGTCA CCTGGTCCTC TCGACGCTGC ACACAAACGA CGCCGCCACC
GCGGTCACCC GCCTGATCGA CATGGGGATC GAGCCGTTCA TGGTCGCCTC TTCGCTCTCC
GCGGTACTAG CACAGCGGCT GGTCCGCGTC ATCTGCCCGC ACTGCAAGGA ATCCTACGTC
CCGGACCGCA GCTACCCCGG CGTCGAACTC CCGCCGCTTC TGTATCGGGG CCGCGGCTGC
GAGAAGTGCT TCAACCTGGG GACCATCGGG CGGGTCGGCA TCTACGAGCT TCTTCCCATC
GACGCAGAAC TCTGCTCCAT GATCATCCGA CAGGCCTCCT CCGGCGCCAT CAAGGAGTAC
GCCGTCTCCA AAGGGATGCG CACCCTGCGC GAGGACGGCC TCGCCAAGGC GGCCCAGGGG
ATCACCACCA TCGAGGAGGT CCTGAGGGTA ACCCAGGACG ATTATGCCGA CCTTTCGCTA
TAG
|
|---|
| Protein sequence | MAESLDIEEI ATRLGLPYQA EIDDSKVDGA LVNRVPLNFA RNNLLLPLHE EDGSIVAASA
DPTNLLALDE MAGLFSQPVS VVAVPRPALL DAVNRLYSRL SGSAQEVVEE LEGEELSTLA
TTFNEPRDLM ELTDEAPVIR LLNSILFQAV KERASDIHIE PFERELEVRF RIDGLLYKML
SPPKVIQEAL TSRVKIMSGL NIAEKRLPQD GRIRVKVAGR DVDIRVSLIP TFFGERVVLR
LLDKQRGVLS LKEIGLSDGN DRLMDRLLSR TSGIILVTGP TGSGKTTTLY AALSQINSPE
KNIITVEDPI EYQLKGVGQI QVNPKIDLTF AAGLRSILRQ DPDIVMIGEI RDAETAEIAM
QASLTGHLVL STLHTNDAAT AVTRLIDMGI EPFMVASSLS AVLAQRLVRV ICPHCKESYV
PDRSYPGVEL PPLLYRGRGC EKCFNLGTIG RVGIYELLPI DAELCSMIIR QASSGAIKEY
AVSKGMRTLR EDGLAKAAQG ITTIEEVLRV TQDDYADLSL
|
|---|
| |