Gene GM21_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0539 
Symbol 
ID8135850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp660345 
End bp663971 
Gene Length3627 bp 
Protein Length1208 aa 
Translation table11 
GC content62% 
IMG OID644868155 
Productprotein of unknown function DUF748 
Protein accessionYP_003020374 
Protein GI253699185 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2982] Uncharacterized protein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTAAGC CTACAAAGTA CATACTTATA TTTGCAGCAA TAGCGATCTC TATTATCGTG 
TTTGTGACCG CGGTTTTGCC GATCATTGTC AGGAATAAGA CGGTCAGCGC CCTGAAGGAG
GCGACGGGGC GCGAGGTGCG CCTGTCTTCC GTCAGCATCA ACCCCTTCAC CCTGACCGTC
ACAATGCGTG ATTTGGCCAT AGCCGAAAAG ACAGGCCCTC CGCTGGTCGC TTTCCGTGAG
GCTAAGGCGT CCCTCGCCCT GGCATCCATT TACAAGCGGG CCTTCATTCT TTCTGAGCTT
GCACTCGACA CGCCCAGCGT CAGCCTGGTG CGCTCCGCAC CCAACCGGTT CAACTTCAGC
GACATCATCG ACCGGCAACC CAAGGGTGAA AAACCGGAGC AAGGGAAGCC GCTACTTTTC
TCCTTGAACA ACATCATCGT GAAGAACGGG TCCGTTGACT TCGACGACCG GATGACGGCA
GGAGGAAGAA AACACGCGGT CCGCGATCTG CAAATAAGCA TCCCGTTTAT CAGCAACATC
CCCTACCTCG CGGACAGGTA CGTGGATCCC CGCCTCGCCG CGGTAGTGAA CGGCGCCCCC
TTCAGCTTCG CCGGAAAGCT GAAACCGCTC AGCAAGTCGC TGGAAACATC GGTGCACATA
GGACTCAAGG GACTGAGCCT CCCCCAATAC CTTGCCTATG CCCCGGCCCC TCCCCCGGTT
GATCTGACCT CCGGGAGGCT CACCCTTGAC ATGGATCTCG CCTACAGGGT ATCCGCCGAA
AAGAAACCGG AACTGATACT GAAAGGTGGG GCGGGGCTGG CGATGGTCCG GGTGAACCAG
CTGGATGGGA AACCGCTGCT GCGGCTCCCC TCGCTGGAGC TGAAGGCCGA CAGGCTGGAG
GTACTGGCCA AATCCTTCGC ATTCGGCTCC ATCGCGCTGA ACGGGCTGGA GCTCTTTGTC
GACCGCGACA GCAATAGCCG CTGGATGTAC GACCGCGTGC TGGCGGCCAC GGAAAAGCCG
AAGGAACCCA AAGAGGAGAA GGACGGCGAG GGGGAGGAAA AAGCGAACTT CACGGCGCGA
TCCTTTGTCA GCAGCAATGG AACCGTCCAC TTTCACGACG CCATCCCCAA AGGGGGCTTC
ACCGGCACCG TTTCCGAGCT CAACCTTTCA CTCAAGGAAT TCAGCACCAG ACCGGGGGGC
TCCGCCAGCT ACGACCTTTC GCTTCTGGCC GACGACGCGA CGCTCAAGAG CCGCGGGCGA
CTTGCCCTAA CCCCTTTGTC GCTGACCGCC TCTATCCAGC TTGCCGGGGC GAAGATCGGG
CGCGCCTGGC CTTACCTGCG GCAGTATCTC ACCGCGCCGG TGCAGGGAAC GGTGGGGCTG
TCGGCGGAAA TCCTCTACAG CGAACTTGAC GGGCTCAGGG TGCAAAAAGG GGATCTCGCC
ATTGCCGGGC TCTCCGCCCG CTACGGCAGT CGTGAAGGGT TCGACCTGGC AACGCTCCGG
GTAAAGGACG CCAGCTTCCG CCAGAGCGCG AACAGACTGG AGGTCGGCGA GGTCAGGCTT
TCGAGGGGGA ACCTCTCCCT ATCGAGGGAG GACGACGGGA CGCTGTCGCC CCTCTCCCTT
CTCGCCGAGC AGCCAAAGCC CAAACCGGCG CCGCCCCGGA AACCCCGCAG GGAGGCCGGT
GACAAATCCA AAGAATTCGC CTATCGCGTG CAACGTCTCC AGCTCGACGG ATTCAAGCTC
GCCTTCACGG ACAAGACCTA CGAGGAGCCG CCCCGCTTCA CGCTTAGGAA CGCAAACCTC
ACCCTCTCCA ACCTGCAGGG GCCCAAATTC ACGCCGATGC CGATGACCTT CGCAGCCACC
TACGGCAAAG GCGCGGGACT TAAGGCCCGG GGGACGCTTA CGCCGGCCCC GTTTCGCTAC
CAGGGGATGA TGAGCGTCGC GCGGCTCCCC ATCCGGGACT TCGAGCCGTA CTTCCCGGAC
TCCTTCAACT TCTCCGTCAT CGGCGGCACC GCCGACCTTT CCCTCAATCT AGACGTCGCC
GCCAGGGATG GCAGAACCAA GGGGCACTTC AAGGGGAGCG CGGGGGTGCG CGACTTCCAC
AGCATAGACG CCGTCGGCGA CCAGGACCTC CTTAAGTGGG AGAGCCTGCA GTTCGACGAA
TTCCTGGGCG AGTTGGAGCC GTTCTCGTTG AACATCCGAC AGGTCGCCTT GAACGACGTC
TACTCCCGCG TCATCATCAG AAAAGACGGC AGCCTCAACC TGCAGGACCT GGTAAAAGGC
GAGGCGCCAC AGTCGGCAGC AGCGACGCCC GCCGCCGCCA TGCAACCGCC GCGCGTCGGC
ACGGACACGG CTACGGCCAC GCCACCGGCC GTTCCGGCGC GAACCGGAGC CCCGTCGCCC
CCCCCTGCCG CGCCACCAGC GCGTCAGGTC TCCGTCGGCA GCGTCACCAT CCAAAACGGC
ACCCTGGCCT TCACGGACAA CCACCTGCCG CAGACCTTCA ACAGCACCTT CTACAACCTC
GGAGGGCGCG TGAGCGGGCT TTCCTCGGAG GAGTCCAAGT TCGCCGACGT CGACCTGCGG
GGCAACCTGG AGAACCACTC CCCCATGCAG ATCACCGGGC GGCTCAACCC GCTGCGGGAC
GACCTGTTCG TCGACCTCAA AATTTCCTTC CGGGACATCG AGCTCTCCCC GGTGACCCCC
TACTCGGGGA CCTACCTCGG CTACGAAATA GACAAGGGGA AGCTTTTCCT CGACCTCAAG
TACCTCATCG AGAAAAAGCA GCTCTCTTCC GAAAACCGCG TCTTCATCGA CCAGTTCACC
TTTGGCAAAA AGGTGGACAG CGATCAGGCG ACCAATCTGC CGGTGCGGCT CGCCATCGCC
CTGCTCAAGG ACCGCAAGGG GGAGATCCAC CTGGACCTCC CGGTCACCGG CCGCACCGAC
GATCCTCAAT TCAGCATCTG GAAGCTGGTC GGACAGGTGC TGAAGAACCT GCTGGTGAAG
GCGGCGACCT CGCCGTTCGC GCTTTTGTCC TCATTGAGCG GTGGCGGGCA AGACTTCAGC
ATCGTCCAGT TCGAACCAGG CTCCAGCTCC TTGCCGCAGG GGGAGAACCA GAAACTTGAA
AAGCTGGCCA AGGTGCTCGC GGACCGCCCC GGCGTGAAGA TGGAGATCAA GGGTTTCGTC
GACAAGGCAA AGGACCCGGA GGGGTACCGG CAGGAACTCC TGGAGCGGAA ACTGCGCCAC
GAGAAATACC TGCACCTGGC AAAGGAACAG GAGGCGACAG AGAGGGAGAG CGGGGAGAGG
GTCAAACTGT CCGATGAGGA GTACACGACT TACCTGAAGG CGGTCTACAA GAAGGAGAAG
TTCCCCAAGC CGCGGAACGC GCTGGGGCTG GTGAAGGACT TGCCGGCAAA CGAGATGAGG
AAGCTGATCA TCGCCAACAC GGTCGTAGCA GAAGCCGACC TGCAGTCACT CGCGCGGGAG
CGGGCCGCGA CGGTGTTCAA CTACCTGGTG GCAAAAGGCG GGCTCCCACC CGAGCGGCTT
TTCCAGGGGA GCGAGGACAT CTACCACCCC CCGGCCCAGG AGAGTGCCGT CCGCAGCAGG
GTCGAGTTCA ACGCCATCGC CCGTTGA
 
Protein sequence
MSKPTKYILI FAAIAISIIV FVTAVLPIIV RNKTVSALKE ATGREVRLSS VSINPFTLTV 
TMRDLAIAEK TGPPLVAFRE AKASLALASI YKRAFILSEL ALDTPSVSLV RSAPNRFNFS
DIIDRQPKGE KPEQGKPLLF SLNNIIVKNG SVDFDDRMTA GGRKHAVRDL QISIPFISNI
PYLADRYVDP RLAAVVNGAP FSFAGKLKPL SKSLETSVHI GLKGLSLPQY LAYAPAPPPV
DLTSGRLTLD MDLAYRVSAE KKPELILKGG AGLAMVRVNQ LDGKPLLRLP SLELKADRLE
VLAKSFAFGS IALNGLELFV DRDSNSRWMY DRVLAATEKP KEPKEEKDGE GEEKANFTAR
SFVSSNGTVH FHDAIPKGGF TGTVSELNLS LKEFSTRPGG SASYDLSLLA DDATLKSRGR
LALTPLSLTA SIQLAGAKIG RAWPYLRQYL TAPVQGTVGL SAEILYSELD GLRVQKGDLA
IAGLSARYGS REGFDLATLR VKDASFRQSA NRLEVGEVRL SRGNLSLSRE DDGTLSPLSL
LAEQPKPKPA PPRKPRREAG DKSKEFAYRV QRLQLDGFKL AFTDKTYEEP PRFTLRNANL
TLSNLQGPKF TPMPMTFAAT YGKGAGLKAR GTLTPAPFRY QGMMSVARLP IRDFEPYFPD
SFNFSVIGGT ADLSLNLDVA ARDGRTKGHF KGSAGVRDFH SIDAVGDQDL LKWESLQFDE
FLGELEPFSL NIRQVALNDV YSRVIIRKDG SLNLQDLVKG EAPQSAAATP AAAMQPPRVG
TDTATATPPA VPARTGAPSP PPAAPPARQV SVGSVTIQNG TLAFTDNHLP QTFNSTFYNL
GGRVSGLSSE ESKFADVDLR GNLENHSPMQ ITGRLNPLRD DLFVDLKISF RDIELSPVTP
YSGTYLGYEI DKGKLFLDLK YLIEKKQLSS ENRVFIDQFT FGKKVDSDQA TNLPVRLAIA
LLKDRKGEIH LDLPVTGRTD DPQFSIWKLV GQVLKNLLVK AATSPFALLS SLSGGGQDFS
IVQFEPGSSS LPQGENQKLE KLAKVLADRP GVKMEIKGFV DKAKDPEGYR QELLERKLRH
EKYLHLAKEQ EATERESGER VKLSDEEYTT YLKAVYKKEK FPKPRNALGL VKDLPANEMR
KLIIANTVVA EADLQSLARE RAATVFNYLV AKGGLPPERL FQGSEDIYHP PAQESAVRSR
VEFNAIAR