| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0516 |
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| Symbol | |
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| ID | 8135827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 635712 |
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| End bp | 638951 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644868135 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003020354 |
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| Protein GI | 253699165 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 92 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATCC ATCTTCACGC ACATTCTTCG CTGTCGCCCA ACTGGGGGGT GCACTCGCCG
GAGACGCTCT GCTCTCACGC GGCTCTGCTG GGCTTCAATA CGCTCGCCAT CACCGACCGC
AACGGGCTCT ACGGGGTGCC GCGCTTCCTC GATGCTGCGC GGGAGACGGG CATCTCGCCC
ATCATCGGGA CGGAGGCGGT CACGCAAAAC AACCGGGCGG TCCTCCTTGC CTGTAACGAG
GAGGGGTACG CCAACATCTC CCGTCTCATC TCGGACTTGC ACTGCCAAAA GAACTTCGAC
CTCACCCAGG CGCTTTCGGA GTACCGGCGC GGCATCATCG TGTTGAGCGA CGACCGAAAG
CTTCTGTCGG CTCTCAAACG GAAGTCGGAG GAGGGGCTGT TCGTGGAGCT CTCGCCGGGA
CATGCGATGC ACAGCGCCCT GACGCTGGCA AGGGATCTCA GGCTGCCGCC GGTGGCGACA
TCTCGGGCCC TCCTCCGCGC TACGCGCTAC GGACGGCAGG CTCCTCCTCC GGCTACGCGC
TACGGACGGC AGGTTCCTCC TCCGGCTACG CCCGGTTCCT TCATAGCTGC GTCCGACGCC
CTCACCCCGA CCCTCTCCCA GAGGGAGAGG GGGAATGGAC TCAACACTCT GGAGGAGAGG
GGGAATGGAC TCAACACTCC GGTGGAGAGC CAACTGACGG GGAACGATGG TCTGGCGGAA
TACCTTGATA ACGCAGGGAC TTCTCCGCAG CTCGACGATT TCCACCTGCA TCGGGTGCTG
CGGGCTATTC ATTTGAACAC GAAGCTCTCG CGACTCACGC CGGAGATGAC GGCGACGGAG
TCTGACGCGC TCTACCCTGC GCAGAAGATG GCGGAGTTCT TTCCGCATTG CCCGGAGGCT
CTGCAAAATT CCATTCGCAT CGCTTCTCTT TGCAAAACGG ATTGGGATTT CTCCAGCACC
ATCTTCCCCG CTTTCCGTGA GTTGGGAACG GAGGCTGCGT TCGAAACGCT GCAGGAACGC
GCTCGCCAGG GGGCAATCTG GCGCTACGGC AGCATCGACG ACCGGGTGCA GGCCCGCCTC
GACAAGGAAC TCTCCATCAT CCGCGACAAG GGGTTCTCTC ATTACTTCCT GGTGGTGGAG
GAACTGACCA AGCAGTCGGA GAGAACCTGC GGCAGGGGGA GTGCTGCGGC CTCTCTCGTC
GCCTACTGCC TCGCGATCAC GCACGTCGAT CCCATCCGGC ACAACCTCTT CTTCGAGCGT
TTTCTGAACG AGGGGAGAAG CGACCCTCCC GACATCGACG TGGACTTTCC CTGGGACGAG
CGCGACGCCA TCCTCGACTT CGCCTTCGCG CGCTACGGCG CCCATCGGGC GGCCATGGTG
GCGAACCAAG TGGGCTTCAA GGGGAGGTCG GCGCTGCGCG AGGTGGCCAA GGTCTACGGC
CTGCCGGACT ACGAGATCAA GGAGATGACG GAACGAATCT CGGGATTTTG GCGCGCGGAG
CAAAGCGCCG CGGCTATGAG CGGCCACCCG CTCTTCAAGG GGGAGTCGCT TTCCTCCGAC
TGGCAGGAGA TCATGTCGAC GGCCAGGCGC CTGAACGGGC AGTTGCGCCA CCTGTCGCTC
CATTGCGGGG GGCTCGTCAT CGTGCCGGAC GAGATCCGCA AGTACGTCCC GGTGGAGATC
TCGCACAAGG GGCTGCCGCT GATCCAGTGG GAAAAGGACC AGACAGAGGA CGCGGGGCTG
GTGAAGATCG ACATCCTGGG AAACCGCTCG CTCGCCGTCA TCCGCGACGC GATGGCGGCG
GTGAAGGAGC AGAAGGGGGT CGAGATCGAC TACGCGACCT GGCGCCCGCT GGATGATGAA
CGGACGCAGA GCCTTCTGCG CCGCGGCCTC ACCATCGGCT GTTTCTACCT GGAATCACCT
TCGGTGCGCC TTTTGCTGCG CAAGATCTGG AGCAGCACGG CGCCGCCGGA GACCTTCCGG
CACGACCTCT TCGAGGTGCT GGTGCAGGCC TCCTCGATCA TCAGGCCGGC TGCGAACAGC
TTCATCCAGG AGTACGTGGC GAGGCTCCAG GGAAAACCCT GGTCGCACCT GCATCCCCTT
TTGGAGAGCG TGCTGGGGGA GACGCTGGGG ATAGCCATCT ACCAGGAGCA GATCACCCAG
ATCGCCATGG AACTTGCGGG TTTCTCCGCC GGCGAGGGGG ATCAGCTCAG GAAGGTGATC
ACCAAGAAGC ACCGCGAGAA GCGGCTCGCG GATTTCCGCG CCAAGTTCAT GGCGGGGGGC
ATGGAGCGCG GGGTCCCGGA AAAGGTGCTG CAGGGGATCT GGGACCAGAT ACTCTCCTTC
GCCGGCTACT CGTTTTGCAA GCCGCACTCG GCGAGCTACG CGCTTTTGAG CGGGAAGGCG
GCCTACATGA AGGCGAACCA CCCGGCGCAG TTCATCGCGG CGGTGATCTC CAACCAGGGG
GGGTACTACT CGCCGTTCGC CTACATCTCG GAGGGGCGCA GGCTGGGGCT TGCCATCCTA
CCCCCGGACA TCAACGAGAG CGAGTACCAC TACACCGGCA AAGAGCAGAC GCTTAGGGTC
GGCCTGATGC AGATCGACGG CCTGACAAGA GACGGCGCCG ACCGGCTCCT CAAGGAGCGC
CGCGAGCACG GCGCTTTCGC CTCCTTCAAG GAGTTCCTGC GCCGGGCGAG GCTGCAGCGC
GCCGACGCCG AGCGCCTGGT GAAGGCCGGT TGCTTCGACG CGCTGGAGGG GGAGGAGAAG
CGCCCGACGC TTCTTTGGGA GCTGCTCCAC TTCCAGCAGC AGGCGACGGC GCTTCTCTTC
GAGCAAAAGA CGGAGCTGCC GCACCCCCCT CCCTACGACG CGCAGATGGT GCTCAGGCAG
GAGGTGGAGA CGCTCGGCTT CCTGGTGTCG CGCCATCCGC TCGCGCTCTA CAAGGCGCAG
TGGCAGCGGC ACCGGCCCAT CAAGGCTTCG GAATTGATCA GGCACACGGG GAAATGGGTG
ACCATGGTGG GGTGGTGGAT CACGACGAAG ACGGTTGAGG ACAAGCACGG CAGGCCGATG
GAGTTCATCT CTTTCGAGGA CGTGACCGCG ATCTTCGACG CCACCTTCTT TCCGGACGTC
TACGCCAGGT TCTGCCGTAA GCTCTCGCAG CGGCGCCCCT ACCTGCTCAA AGGGATGGTG
GAAGAGGAGT TCGGGGTAGC AACACTCAGG GTGAAGTGGG TCGGCTTTCT GGACGGGTAG
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| Protein sequence | MFIHLHAHSS LSPNWGVHSP ETLCSHAALL GFNTLAITDR NGLYGVPRFL DAARETGISP
IIGTEAVTQN NRAVLLACNE EGYANISRLI SDLHCQKNFD LTQALSEYRR GIIVLSDDRK
LLSALKRKSE EGLFVELSPG HAMHSALTLA RDLRLPPVAT SRALLRATRY GRQAPPPATR
YGRQVPPPAT PGSFIAASDA LTPTLSQRER GNGLNTLEER GNGLNTPVES QLTGNDGLAE
YLDNAGTSPQ LDDFHLHRVL RAIHLNTKLS RLTPEMTATE SDALYPAQKM AEFFPHCPEA
LQNSIRIASL CKTDWDFSST IFPAFRELGT EAAFETLQER ARQGAIWRYG SIDDRVQARL
DKELSIIRDK GFSHYFLVVE ELTKQSERTC GRGSAAASLV AYCLAITHVD PIRHNLFFER
FLNEGRSDPP DIDVDFPWDE RDAILDFAFA RYGAHRAAMV ANQVGFKGRS ALREVAKVYG
LPDYEIKEMT ERISGFWRAE QSAAAMSGHP LFKGESLSSD WQEIMSTARR LNGQLRHLSL
HCGGLVIVPD EIRKYVPVEI SHKGLPLIQW EKDQTEDAGL VKIDILGNRS LAVIRDAMAA
VKEQKGVEID YATWRPLDDE RTQSLLRRGL TIGCFYLESP SVRLLLRKIW SSTAPPETFR
HDLFEVLVQA SSIIRPAANS FIQEYVARLQ GKPWSHLHPL LESVLGETLG IAIYQEQITQ
IAMELAGFSA GEGDQLRKVI TKKHREKRLA DFRAKFMAGG MERGVPEKVL QGIWDQILSF
AGYSFCKPHS ASYALLSGKA AYMKANHPAQ FIAAVISNQG GYYSPFAYIS EGRRLGLAIL
PPDINESEYH YTGKEQTLRV GLMQIDGLTR DGADRLLKER REHGAFASFK EFLRRARLQR
ADAERLVKAG CFDALEGEEK RPTLLWELLH FQQQATALLF EQKTELPHPP PYDAQMVLRQ
EVETLGFLVS RHPLALYKAQ WQRHRPIKAS ELIRHTGKWV TMVGWWITTK TVEDKHGRPM
EFISFEDVTA IFDATFFPDV YARFCRKLSQ RRPYLLKGMV EEEFGVATLR VKWVGFLDG
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