Gene GM21_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0474 
Symbol 
ID8135783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp582407 
End bp583081 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID644868092 
ProductSNARE associated Golgi protein 
Protein accessionYP_003020312 
Protein GI253699123 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0000000000739697 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCTGA AAAAGATCCT CATCCTTGTC GCCGCCGTCA TCGCGGTGAC CCTCTTCTTC 
TACCTCGACC TCGGCCGTTA CCTGACCCTG GAGTCGCTCA AGGCCAACCG GCAGGCGCTC 
ATCCAGTACT ACGCGGCGCA TGAGGCCGCC ACCGTCGCCG GGTTCATGGC TCTTTACATA 
CTGCAGACGG CGCTCTCGCT TCCCGGTGCA GCCATCCTGT CGCTCGCGGC AGGCGCCATC 
TTCGGCTCCC TCGCCGGGAC CTTCTACGCC GTCGTGGCCG CAACCGTCGG AGCGACGCTC 
GCTTTCGTGG TGACCCGCTA CCTGCTGCGC GACCTCGTGC TCGACAGGTT CGGACCGAAA 
CTGGAGGGGC TCAACCGTGA ACTGGAAACG CGCGGTTTCA ATTACCTGCT CTTTCTGAGG 
CTGGTGCCGC TGTTCCCCTT TTTCCTCATC AACCTCGCCG CCGGCCTCAC CCGGCTGCCG 
TTACGCGTCT TCGTCCCCGG GACGCTGATC GGGATCATCC CGGGAGGGTT CGTCTTCGTG 
AACGCCGGGG CGAGCCTCGC CACCATCGAT TCCCTCTCCG ACGTCGCCTC TCCCCGGGTG 
CTCGGCTCCT TCGCGCTCCT CGGGCTCTTC GCCCTGGTCC CGGTGATCTA CGGGAAGATT 
AAAAAGAAAG CCTAA
 
Protein sequence
MNLKKILILV AAVIAVTLFF YLDLGRYLTL ESLKANRQAL IQYYAAHEAA TVAGFMALYI 
LQTALSLPGA AILSLAAGAI FGSLAGTFYA VVAATVGATL AFVVTRYLLR DLVLDRFGPK 
LEGLNRELET RGFNYLLFLR LVPLFPFFLI NLAAGLTRLP LRVFVPGTLI GIIPGGFVFV 
NAGASLATID SLSDVASPRV LGSFALLGLF ALVPVIYGKI KKKA