Gene GM21_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0444 
Symbol 
ID8135753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp536509 
End bp537006 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID644868062 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003020282 
Protein GI253699093 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones108 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAAA GCAGACGTTT GAAACGGCTG CAACGCAACA ACAACCGCAG GCAGGCGTTT 
TTGAACCTGA TACCCATGCT GGACGTGCTT TCGGTCCTGG TGTTCTTCCT GCTTTTCCAT
TCCTTCAACG GCGAAATGCC GGAACAGCGG CTTGCTCTCC CGACCTCGGT GGTGGAGACG
AAGCCGAGGG GGACCGTCGT GGTCACGGTC ACCCCGGAGA CGGTGGTGGT GCAGGGGCAG
ACCGTGGCTC GGACCGCCGA CCTTTACGAC GACCGGGTCG CGACGGTCCG GGAGGTGACT
CAGCGGCTGG ACCAGATCGA AAACAGCATC AACGAGGCCA GGACCAAGCC GGCGGCCGAA
AACGAAACGC GGGAAGTCAC GCTTTTGGCC GACAAAGCCA TTCCTTTCAA GGTGCTTAAA
AAAATAATGA CGAGCTGCAC GGCTTCTGGA TACGGGAAGA TTTCGCTTGC CGTGATCCAG
AAGGCCTCGC ATGCCTAG
 
Protein sequence
MRESRRLKRL QRNNNRRQAF LNLIPMLDVL SVLVFFLLFH SFNGEMPEQR LALPTSVVET 
KPRGTVVVTV TPETVVVQGQ TVARTADLYD DRVATVREVT QRLDQIENSI NEARTKPAAE
NETREVTLLA DKAIPFKVLK KIMTSCTASG YGKISLAVIQ KASHA