| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0440 |
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| Symbol | |
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| ID | 8135749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 533928 |
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| End bp | 534746 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644868058 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003020278 |
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| Protein GI | 253699089 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 108 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT TCCCGAGAAG CCGTGAAGTT TTTTCTGGTC TGCCGTCGGA CTACCATCTT
CCGCCTACGG GGCCGCGCCC GTCGAAGGGG TCCGGGCCGC AGGCAGAAGA GGGGCCGGGT
GAGGGGAGGC TCAACCGCCT CTTTTGGGCC CTTGGACTCC TGGTTCTTGC CGGGTGCGCG
ACAGGCGGTC AGGCCAGGAA GGATTCGTCG GCAGCCCCGG CTGTCGTGGC TGCGAAACCG
GCCCCGCCGC CTGCCGGGCC TTCGGTGGAG CGGTTCACCG ACGGCAGGGA AGGCTTCGTC
ATCAGGGAAC CGTCCAACCT GGGGTCGGAT GCGCGTGCGG AGTTCGAGAG GGCCATGGCC
TTTCTTGCGG GGGGGGAATA TCAAAAGAGC GCAGAGCTGC TGGAAAAGGT AATAGCCAAG
GCGCCTTCTC TGACCGCACC CCGTATCAAC GCGGCCAACG CCTACAGCCA CCTGAACCAG
CCGGAGCTGG CCGAGCAGCA TCTCAAAGCG GCATTGGAGG CGGTCCCGGG GCATCCGGCG
GCGAGCAACG AATACGGCTT GCTGTTGCGC AAGAGCGGAC GCTTCCTTGA GGCGCGAAGC
ACCTACGAAA AATCGCTGGC GGCGTTCCCC GAGTACCATC CGCTGGAAAG AAACCTCGCC
ATACTCTGTG ATCTCTACCT GAAGGACCTC ACCTGCGCCC AGACGCATTA CCAGAGCTAC
AGCAGGGCGA CCCCCGGCGA CAAGCAGGTG AAACTGTGGA TCGCGGACCT GCAGACCCGC
ACCGGGCACC TGGCCCTGAA CACGGAAGCG AGGCAGTAG
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| Protein sequence | MKRFPRSREV FSGLPSDYHL PPTGPRPSKG SGPQAEEGPG EGRLNRLFWA LGLLVLAGCA
TGGQARKDSS AAPAVVAAKP APPPAGPSVE RFTDGREGFV IREPSNLGSD ARAEFERAMA
FLAGGEYQKS AELLEKVIAK APSLTAPRIN AANAYSHLNQ PELAEQHLKA ALEAVPGHPA
ASNEYGLLLR KSGRFLEARS TYEKSLAAFP EYHPLERNLA ILCDLYLKDL TCAQTHYQSY
SRATPGDKQV KLWIADLQTR TGHLALNTEA RQ
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