Gene GM21_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_0354 
Symbol 
ID8135661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp431187 
End bp432119 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content63% 
IMG OID644867971 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003020193 
Protein GI253699004 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0000000606737 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACTT CCAACAGCAA GAAACCGATG GTGTTAGTGA CAGGGGCTAC CGGGTTCATC 
GGCAGGAGGC TGGTAGCCGC CCTAGCCGAA GAGGGGATAC CGGTGCGCTG TCTGGTGCGC
AACGTCCAGT CGCCGGTTCC CGCCGGCGGG GAGGTGGTCC AGGGGGACCT GCTGCAAAGA
GAGACCCTGG ACCGGGCTCT GGAGGGGATC GAAACCGCCT ACTACCTGGT GCACGCCATG
TCCGGCGATC GCGCGGGCTT CGAACGACGC GACCGTGAGG CCGCTGAAAA CTTCGTCGCC
GCCGCCGCGA GACAGGGGCT TAGGCGGGTC ATCTACCTGG GCGGGCTGGG CGATGAGAAG
GACGACCTCT CCGAGCACCT TGCCAGCCGG TTGGAGGTCG CGCGGATCCT GCAGGGGGGC
CCCTTCAAGA CCACCTACCT GCGCGCCGCC GTCATCATCG GCGCAGGCGG AGCCTCCTTC
GAGATGATCC GTGCACTGGT GGAGAGGCTC CCGGTCATGA TCACCCCGCG CTGGGTCTCC
ACCCGCTGCC AGTTCATAGC GGTCGGGGAC GTGATCTCCT ACCTGGTGGG GTGCCTGCTG
CACGAGCAGA CCGCGGGAAA GACCTATGAC ATCGGCGGGC CGGAAATCCT CTCCTACCGG
GAGATGATGG AGCGTTTCGC CGAGATAGAG AAGAAGTTCA TCAAGATCCT GCCGGTTCCC
TTTCTCACCC CGAAGCTCTC TTCCTACTGG CTCTGGCTGG TCACGCCGAT AAAGCCCTCC
ATCTCGGCCC CTCTTATCGA GGGGCTTGGC AACGAAGTTG TCTGCCACGA CGACAAGATT
CGGGAAATCA TTCCCCTGAC GCTGACGGGT TACTACGACG CGGTGAGAAT TGCACTCGAG
GAGGTGAGCG CTCTCCCCAA AGAGCCGTCC TGA
 
Protein sequence
MSTSNSKKPM VLVTGATGFI GRRLVAALAE EGIPVRCLVR NVQSPVPAGG EVVQGDLLQR 
ETLDRALEGI ETAYYLVHAM SGDRAGFERR DREAAENFVA AAARQGLRRV IYLGGLGDEK
DDLSEHLASR LEVARILQGG PFKTTYLRAA VIIGAGGASF EMIRALVERL PVMITPRWVS
TRCQFIAVGD VISYLVGCLL HEQTAGKTYD IGGPEILSYR EMMERFAEIE KKFIKILPVP
FLTPKLSSYW LWLVTPIKPS ISAPLIEGLG NEVVCHDDKI REIIPLTLTG YYDAVRIALE
EVSALPKEPS