Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0351 |
Symbol | |
ID | 8135658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 429220 |
End bp | 430134 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644867968 |
Product | ROK family protein |
Protein accession | YP_003020190 |
Protein GI | 253699001 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00000000106958 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGTAT CGGAGCCGTA CCGCATAGGA GTGGATCTGG GGGGGACCAA GACGGAGGTC GTGGTGCTCG ATCCGCAGGA CGGGGTCGTC TTCAGGGAAA GAAGGAAGAC CCCGCTGGCT GAGGGATACC ATGCCGTGCT GAACTGCGTG GCCGACCTGG TGCGGGATGG CGCCTTACGG GTGCCGGCGG CCAATAGCTG CACGGTCGGC ATCGGCATCC CGGGCTCCGT CGATGCCGTC AGCGGACTGG TGCGCAACGC CAACTCGGTC TGCCTCATCG GGCGCCCGCT GCAGGGCGAT CTGGAGCGGC TTTTGGGGAG GCGGATCGGG GTGAGAAACG ATGCCGACTG CTTCGCCATG GCGGAATGCC GCAAGGGGGC GGGAGCGGGT TACGGCCTCG TCTTCGGCGT CATCATGGGA ACCGGTTGCG GCGGGGGGAT CTGCATCGAC GGCGTGGTGC GCGAGGGACC GCACCGGATC TGCGGGGAGT GGGGGCATTT TGCGCTGGAC CCCTCCGGCG CCCCCTGTTA CTGCGGCAAC CGGGGGTGCA TCGAGACGAA GATCAGCGGC TCCGGGGTGG AGGCCGCATT TGCCGCGCGT TACGGCGAGA GCCTCAGCAT GAAGGAGATC GTGGCGGGGG CAAGGCTCGG AGAGCCGCGC TGCGCGACCG CCTTCAACGC CTTCCTGGAC GACTTCGGGC GCAGCCTGGG CGGCATCATC TCCATTCTCG ACCCCGATGC GGTGGTGCTG GGCGGGGGGC TTTCCAATAT CGACGAGCTC TACCTCGCAG GGGTCGAGCG GGTGAGGCAC TACGCCTTCC ACAACGACCT GCGCACCCCG ATCCTGAAGC ACATGCTGGG GGATTCGGCA GGGGTCTTCG GCGCGGCCTG GATCGGCACC GGTTCGGCTC CCTGA
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Protein sequence | MPVSEPYRIG VDLGGTKTEV VVLDPQDGVV FRERRKTPLA EGYHAVLNCV ADLVRDGALR VPAANSCTVG IGIPGSVDAV SGLVRNANSV CLIGRPLQGD LERLLGRRIG VRNDADCFAM AECRKGAGAG YGLVFGVIMG TGCGGGICID GVVREGPHRI CGEWGHFALD PSGAPCYCGN RGCIETKISG SGVEAAFAAR YGESLSMKEI VAGARLGEPR CATAFNAFLD DFGRSLGGII SILDPDAVVL GGGLSNIDEL YLAGVERVRH YAFHNDLRTP ILKHMLGDSA GVFGAAWIGT GSAP
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