| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0339 |
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| Symbol | dapF |
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| ID | 8135646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 417902 |
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| End bp | 418738 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644867956 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003020178 |
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| Protein GI | 253698989 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 3.6920099999999997e-35 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAAATTCA CAAAGATGCA GGGTGCGGGC AACGACTACG TGTATGTCAA CTGTTTCGAA
GAGGCGGTGC ACGACCCTGC CGCGGTGGCG ATAAAGGTAT CCAACCGCAA CTTCGGCATC
GGATCGGACG GGCTGATCCT GATCATGCCG AGCGAAGTGG CTGACGTAAG GATGCGGATG
TTCAACTCGG ACGGATCGGA AAGCGAGATG TGCGGCAACG GCATCCGCTG CGTGGCGAAG
TACGCCTACG ACCACGGCAT AGTGTCGAAA AACGAGATCA CGGCCGAAAC CGGCGCCGGG
ATCCTGACCC TGCAGCTTTT CACCGGCGCC GGCGGCAAGG TGGAAAAGGT GCGGGTCAAC
ATGGGGCCGC CGAGGCTGAC CAGGAAAGAG ATCCCCATGC TGGGAGAGCC TGAGGAGCGG
GTGGTCAACG TGCCGCTCAA CGTGCTCCAC TCCAGCTTCA ACATCACCTG CGCCTCCATG
GGAAACCCCC ATTGCGTCAT CTTCGTGGAC GACGTGGACA GCTTCCAGGT CGAGAAGTAC
GGCCCGCTGA TCGAGAATCA CGAGTTGTTC CCGCGCCGTA CCAACGTGGA ATTCGTCCAG
ATCGTCTCCC GCACCGAAGT GCGCCAGCGC ACCTGGGAAC GCGGCGCCGG CGAAACGCTT
GCCTGCGGCA CCGGCTCCAG CGCCGTCACC GCCGCCTGCG TCCTGAACGG GCTGACCGAG
AAGCGCATCC TGAACCACTT AACCGGCGGC GACCTGGAGA TGGAGTGGGG GGAGGACGGC
AACATCTACA TGACCGGCCC GGCAGTCGAG GTCTTCAGCG GCGAGATAGG CTTATAA
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| Protein sequence | MKFTKMQGAG NDYVYVNCFE EAVHDPAAVA IKVSNRNFGI GSDGLILIMP SEVADVRMRM
FNSDGSESEM CGNGIRCVAK YAYDHGIVSK NEITAETGAG ILTLQLFTGA GGKVEKVRVN
MGPPRLTRKE IPMLGEPEER VVNVPLNVLH SSFNITCASM GNPHCVIFVD DVDSFQVEKY
GPLIENHELF PRRTNVEFVQ IVSRTEVRQR TWERGAGETL ACGTGSSAVT AACVLNGLTE
KRILNHLTGG DLEMEWGEDG NIYMTGPAVE VFSGEIGL
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