Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_0262 |
Symbol | |
ID | 8135569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 318622 |
End bp | 321063 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644867883 |
Product | homocysteine S-methyltransferase |
Protein accession | YP_003020105 |
Protein GI | 253698916 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase [TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.00180962 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGATGT CTTTTATGCA GGCGGTTAAA GAGCGGGTGC TGGTTTTGGA CGGCGCCATG GGGACCATGC TGCAGGAGCG CGGGCTGAAG CCGGGCCAGT CCCCGGAGGA GATGAACCTC ACCGCGGCCG AGGTCGTCGC CGGGGTGCAC CAGGCTTATC TGGACGCCGG CGCCGACATC ATCGTCACCA ACACCTTCGG GGGCACGAAG GCGAAGCTGG AGCACTACGG CCTGGGCGAC CAGGTGGCGC GCATCAACGC CGAGGCGGTG AGGATCGCGC GCGAGGTCGC AGGCGAAAAG GCCTACGTGG CAGGTTCCAT AGGCCCCACC GGCCGCTTCC TGGAGCCGGT CGGCGACATG AGCTTCGACG AGGCGGTCTC GCTCTTCCGC GAGCAGGCGC AGGCGCTCGT CGACGCCGGC TGCGACCTGA TCAGCTTCGA AACCTTCCTG GACATCAAGG AGATCCGCGC CGGGGTCATC GCGGTGCGCG AGATCTCTCA GGAGATCCCG GTCATCGCCA TGCTCACCTT CGAGGAGAAG GGGATAAGCG TTCTCGGCAC CCCGCCGCAA GCCGCCGCCA TCACACTGGA GGCGGTGGGC GCGACCATCG TCGGCTCCAA CTGCGGCTTG GGCCCTGATG GGATCTACCA GATCCTCTCA GACATGAGGG ACGTCACTGC GCTGCCGCTC ATCTCCCAGG CGAACGCGGG GCTCCCGATC CTCAAGGATG GCGTCACCAT CTTCCCGGCG ACCCCGGACG AGATGACCGC CTACCACGAC CGGCTGATCG AGCTCGGCGT CCGCATCATA GGCGGCTGCT GCGGCACCAC CCCCGCCCAT ATCTCCGCCA TCAAGAAGGC GCTGGCCGCG AAACAGGCGC CGTTCGCACC CAAGAAGGAG GACGGCACCA CCTGGCTCTC CAGCCGCGGC AGCTTCGCCG CGGTCGGCGC CGCGCATCCG GTGGCGCTCA TCGGCGAGCG GATCAACCCG ACCGGGAAGA AGCTCTATTC CCAGGAGCTC AGGGAAGCCA AGGTGAGCTA CATCCGCCGC GAGGCGCTGG AGCAGGCCGG GCTCGGAGCG ACGCTTCTCG ACGTGAACGT CGGCACCCCG GGGATCGACG AGCCGGCCGC CATGGAGCGC GCCGTCTTCT GCATCACCGG CGCGGTGCAG ACACCGCTGG TGCTCGACTC CTCCTCCCCC GAGGCGCTGG AGGCTGGGCT TAAGGCAGCC GACGGCAAGG TGCTCGTAAA CTCCGTGAAC GGCGAAGAGA AGAGCCTCGC AGCCGTCTTG CCGCTCGCGA AGAAATACGG CGCGGCGCTG GTCTGCCTCA CCCTCGACGA GGCGGGTATT CCCGCCGAGG CCGCGGGGCG CGTCGCCGTC GCCGAGAAGA TAGCCGCTGC CGCGCTGGCC GCTGGCGTTA AGCGAAGCGA CCTCGTGGTC GATTGCCTAA CACTCACGGT GAGCGCCGAG CCCAAGGGGG CGCTGGTTGC GCTGGAGGCG GTGCGCCAGG TGAGCGCGCT TTCGCTCAAT ACGACGCTCG GCGTTTCCAA CATCTCCTTC GGCCTTCCCT GCCGCCCCCT CATCTCCTCC ACCTTCTTCT CCATGGCCAT AGCCGCGGGG CTCACCTCGG CAATCGTCAA CGTGAAGGAG GCGCCGATGA TGGCTGCCTG GAGAAGTTCC ATGGTGCTCT TGGAAAAGGA CGTCAACGCG GCCGGCTACA TCGAGGCTTA CAAAGGGCAG GCGGTCGGCG CCACCGTGGA GCCCGCCGCG GCCCAAGGTG CTGCCGTGGC CCGGGCCGCG GCCGTCGAGC CGGAAGGTGT GCGCGGGCGC CTCTCCAAGG CGGTCATCAA CGGCGAGGCG GACAACGTGG TGGCGCTGGT GGAAGAGGCG CTCTCCGAAG GGCTGACCCC GATGCAGATC AGCTCCGAGG CGCTCCTCGT TGGGCTCGAC GAGGTGGGAA GGCGCTTCGG CTCCGGCGAG TTCTTCCTGC CGCAGGTGAT GGTCTCCGCC GACACCATGA AGACCGCCTT CGCCCGATTG AAGATGGAGC TCTCCACCGG CGGTTTGCAG AGCATCGGCA AGATCCTGAT GGCGACCGTC GAGGGGGACA TCCACGACAT CGGCAAGAAC ATCCTGGTTA CCCTCCTGGA GAACAACGGC TTCGAGGTGA TCGACCTGGG CAAGAACGTC CCGGCCGACC GCATCCTGTA CGAGGCTCGC GCCCACCAGG TGGACGCGGT CGGGCTCTCC GCGCTGATGA CGACGACCAT GGCGCAGATG GACAAGGTGG TCAAGCTTTT GAAGGCCGAG GGGGTGAAAA GCTTCACCAT GGTCGGCGGG GCCGTGGTCA CCCAGGAATA CGCCGACGAG ATCGGCGCCG ACCTCTACGC CAAGGACGCC ATGGAGGCTG TGGCGCGCGT CAAGAAACTG CTGGCAAAAT AA
|
Protein sequence | MKMSFMQAVK ERVLVLDGAM GTMLQERGLK PGQSPEEMNL TAAEVVAGVH QAYLDAGADI IVTNTFGGTK AKLEHYGLGD QVARINAEAV RIAREVAGEK AYVAGSIGPT GRFLEPVGDM SFDEAVSLFR EQAQALVDAG CDLISFETFL DIKEIRAGVI AVREISQEIP VIAMLTFEEK GISVLGTPPQ AAAITLEAVG ATIVGSNCGL GPDGIYQILS DMRDVTALPL ISQANAGLPI LKDGVTIFPA TPDEMTAYHD RLIELGVRII GGCCGTTPAH ISAIKKALAA KQAPFAPKKE DGTTWLSSRG SFAAVGAAHP VALIGERINP TGKKLYSQEL REAKVSYIRR EALEQAGLGA TLLDVNVGTP GIDEPAAMER AVFCITGAVQ TPLVLDSSSP EALEAGLKAA DGKVLVNSVN GEEKSLAAVL PLAKKYGAAL VCLTLDEAGI PAEAAGRVAV AEKIAAAALA AGVKRSDLVV DCLTLTVSAE PKGALVALEA VRQVSALSLN TTLGVSNISF GLPCRPLISS TFFSMAIAAG LTSAIVNVKE APMMAAWRSS MVLLEKDVNA AGYIEAYKGQ AVGATVEPAA AQGAAVARAA AVEPEGVRGR LSKAVINGEA DNVVALVEEA LSEGLTPMQI SSEALLVGLD EVGRRFGSGE FFLPQVMVSA DTMKTAFARL KMELSTGGLQ SIGKILMATV EGDIHDIGKN ILVTLLENNG FEVIDLGKNV PADRILYEAR AHQVDAVGLS ALMTTTMAQM DKVVKLLKAE GVKSFTMVGG AVVTQEYADE IGADLYAKDA MEAVARVKKL LAK
|
| |