| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0150 |
|---|
| Symbol | |
|---|
| ID | 8135453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 180119 |
|---|
| End bp | 181606 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644867769 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_003019993 |
|---|
| Protein GI | 253698804 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCTG ATTTCCCGAT ACTTTCCCTG CTGGTCTTTC TGCCGCTTGT GGCGGCGCTT
CTCCTTGCTG CGTTGCGCCC TTCGCAGGCG CTGGCGCGAG GTTTCGCCCT GGCAGTCGCC
CTTATGGAGC TGGCGCTCGC AACTTTTCCG CTTCTCGGAT CCTCGCCCTC CGGTACCTAC
CCTGGCGCAC CCAGCGGCTT CTTCTTGTTC GAAGACCTCC CCTGGATCGA GCGTTTCGGC
ATCCGTTACA CCCTGGGCAT GGATGGCATC AGTCAGATCA TGGTGCTCCT GACCTCGTTC
ATTACCGTCG TCGCCGTCCT CATCTCATGG AGACAGATCA AGGAGCGGTC GCCTGTTTAC
TATGCCCTGC TTCTCGCCCT GCAATGCAGC ATCCAGGGGG TATTCCTCAG CCTCGACCTG
TTCCTTTTCT ACCTTTTCTT CGAGGCGATG CTGATCCCCA TCGTGTTACT CTCCGGCATC
TGGGGGGACG GGCGCCCCGT TTATTCCGCC GTCAAGTTCT TCCTCTATAC CTTCGTCGGC
TCGCTGCTCA TGCTGGTTTC CATCATCACG CTCTACCTGA TGCACGGCGC GCAGACCGGG
AGCTACACCT TCGCCCTCAC TGCTTTGGTG CAAACCAGCG TCCCCTATGG TCTCGCGCTC
TGGCTTTTCG CCGGGTTCCT GGTGGCCTTC GCGGTGAAGA TCCCGCTTTT CCCGCTGCAC
AGCTGGCAGC CCGACGCCTA CGCCGACGCC CCTATCGCCG GGACGTTGAT CCTCGCCAGC
CTGCTTTCCA AGACCGGCGC CTACGGCCTG ATTCGTTTCG CCTATCCGCT TTTTCCCGAA
GCCGCCCGCG CCTTCACCCC CGTTCTCTAC CTGGCCGCCG TCTTCGTGAT CAGCTACGGC
GCCTGGATCG CTTTCGCGCA AAAGGACATG AAGCGGCTGG TGGCGTACTC AAGCCTCAGC
CACATGGGTT TCATCGCCCT GGGGATAGCC GCCTGGAGCC CGCTAGCCCT GTCCGGGGCG
CTTTTGCAGA TGGTGAACCA TGCCGTCACC ACCGGGGCGC TTTTCGTGGT GGTAGGCATG
CTGGACGAGC GCGCCGGCAG CAGGGATCTC GCCGCCTACG GCGGCATCTG GGGGAAGGTT
CCCGCGCTAT CGTTCTTTTT CCTCTTTTTC TGCATGGCCT CCGCCGGGCT GCCGGGGTTG
AACAACTTCG TAGGCGAGTT CCTCGTGCTC TTGGGGGCCT TCAAGGTTGC GCCCGCAGCC
GCCCTGGGCG CCTTTTTGGG CATCGTGCTG ACGCTGATCT ACACCGTGAG GCTGGTGCAG
GAGGTGCTGT TCGTCAGGGA GAGGAAGCCG CTGGAGTTGA AGGATCTGAC CATGAGGGAA
GCCGGGGTCC TGGCCCTCCT CGCGCTGGTA GCCGTGTACC TAGGCGTTCA CCCCAACCCC
GTGCTGGACC TGTTCAAGGA GCCGATAGCT TTATTGGTTT CGAAGTAA
|
|---|
| Protein sequence | MTPDFPILSL LVFLPLVAAL LLAALRPSQA LARGFALAVA LMELALATFP LLGSSPSGTY
PGAPSGFFLF EDLPWIERFG IRYTLGMDGI SQIMVLLTSF ITVVAVLISW RQIKERSPVY
YALLLALQCS IQGVFLSLDL FLFYLFFEAM LIPIVLLSGI WGDGRPVYSA VKFFLYTFVG
SLLMLVSIIT LYLMHGAQTG SYTFALTALV QTSVPYGLAL WLFAGFLVAF AVKIPLFPLH
SWQPDAYADA PIAGTLILAS LLSKTGAYGL IRFAYPLFPE AARAFTPVLY LAAVFVISYG
AWIAFAQKDM KRLVAYSSLS HMGFIALGIA AWSPLALSGA LLQMVNHAVT TGALFVVVGM
LDERAGSRDL AAYGGIWGKV PALSFFFLFF CMASAGLPGL NNFVGEFLVL LGAFKVAPAA
ALGAFLGIVL TLIYTVRLVQ EVLFVRERKP LELKDLTMRE AGVLALLALV AVYLGVHPNP
VLDLFKEPIA LLVSK
|
|---|
| |