Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4287 |
Symbol | |
ID | 8135290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4853520 |
End bp | 4854848 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644867609 |
Product | N-glycosyltransferase |
Protein accession | YP_003019837 |
Protein GI | 253690647 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAGA GAATCTTAGC TTTCTTAATC TTATGTCTGA TGCTCGGCAT CCCTTTTGGC GCGATGTTTT CCTTTACGGG GGATGTCGTT CTTAACTTTA CCTTTTTCTG GCCTTTATTT ATGTCGGGGA TATGGATAAC GGGAGGGCTG TATTTTTGGT TTCACTATGA ACGCCATTGG CGCAAGGGAG CAGAGGGGAT ACCCGATGAA CCCGCCGGGC GCCCGTTAGT TTCGATCCTG ATCCCCTGCT ATAACGAAGG GCCTAACGTA TGTGAAACGA TTGAAGCGGC ATTAGCACAG CGTTATACCC ATATCGAAGT GATCGCGGTG AATGATGGTT CCAATGATGA CACGGGAGAT GTGCTCGATC GGTTGGCGAA CCAATATGAC AAACTGCGAG TCATTCATCT GGCGAATAAT CAGGGCAAGG CGGTGGCGCT TCAAACCGCG TGTGCCGCGG CCAAGAGCGA TCTGCTGGTG TGTATTGATG GCGATGCGCT TCTCGATCCC GATGCTGTCG CCTATTTAGT TAACCCGTTA ATTAATAATC CGCGGGTCGG CGCAGTAACG GGAAACCCAA GAATAAGAAC GCGCTCGACG CTGATTGGGC GTATTCAGGT TGGTGAATTT TCCTCAATTA TTGGGTTGAT CAAACGTACA CAGCGCGTTT ACGGCAAAGT GTTCACCGTT TCTGGCGTTA TCGCCGCTTT TCGTCGCAGT GCGTTAGCAG AAGTTGGCTA CTGGAGTACC GATATGATCA CGGAAGATAT CGATATTAGC TGGAAGCTCC AATTGCGCCA TTGGTCGATA TTTTTTGAAC CAAGAGCACT GTGTTGGATT TTGATGCCGG AAAAACTCTC TGGCTTGTGG AAACAGCGGC TACGTTGGGC GCAGGGCGGT GCCGAGGTCT TTTTAAAAAA CTTCCGTCAT TTATGGTCAT GGCGCTATCG CCGCATGTGG CCGTTATTCC TTGAATACTC GATTTCAATA TTATGGGCCT TCACTTATGC CATGAGCGTC TTGTTGTATT TATTAGGCTT TTTAATACAA CTGCCTGAGG GGATTCGGGT AGAAACGCTC TTTCCTCCCG CGTTTACTGG CATGATGATT GGCGTGGTCT GTTTAATCCA GTTTGCCGTC AGTATGTTGA TCGAACGACG CTATGAGAAA GATATTGGCA AATATCTGTT CTGGGTAATC TGGTATCCCA TGGTGTATTG GACGTTGAGT CTGTGTACCA GTCTGGTCAG CTTTCCAAAG GTCATGCTGC GTTCCCGTAA AAAACGAGCG CGTTGGGAAA GCCCAGATCG TGGTATTGAA AGAGGATAA
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Protein sequence | MIERILAFLI LCLMLGIPFG AMFSFTGDVV LNFTFFWPLF MSGIWITGGL YFWFHYERHW RKGAEGIPDE PAGRPLVSIL IPCYNEGPNV CETIEAALAQ RYTHIEVIAV NDGSNDDTGD VLDRLANQYD KLRVIHLANN QGKAVALQTA CAAAKSDLLV CIDGDALLDP DAVAYLVNPL INNPRVGAVT GNPRIRTRST LIGRIQVGEF SSIIGLIKRT QRVYGKVFTV SGVIAAFRRS ALAEVGYWST DMITEDIDIS WKLQLRHWSI FFEPRALCWI LMPEKLSGLW KQRLRWAQGG AEVFLKNFRH LWSWRYRRMW PLFLEYSISI LWAFTYAMSV LLYLLGFLIQ LPEGIRVETL FPPAFTGMMI GVVCLIQFAV SMLIERRYEK DIGKYLFWVI WYPMVYWTLS LCTSLVSFPK VMLRSRKKRA RWESPDRGIE RG
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