Gene PC1_4281 details

Gene Information

• Locus tag: PC1_4281
• ID: 8135284
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4843960
• End bp: 4844619
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644867603
• Product: hypothetical protein
• Protein accession: YP_003019831
• Protein GI: 253690641
• COG category: [S] Function unknown
• COG ID: [COG4380] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCGTT TCTTAGGATT ATGTGGTCTG GTTTTTGCGC TGGTGCTGAC CGGTTGTGCT 
AAACCCGTTC CCTATGACTA CACGGCATTT AAGCAGAGTA AACCTAAGTC TATTCTGGTA 
TTGCCGCCAG TTAACCATTC GCCGGATGTG AAAGCGAGCT ATAGCCTGCT TTCACAAGTT 
ACCTACCCGC TGGCGGAATC CGGTTATTAC GTCTTGCCTG TCGCTGTCGT GGACGAAACG 
TTCAAACAGA ATGGTCTGTC GACCGCGGCG GATATTCATG CGCTGAGTAC GGCGAAGCTG 
CACCAAATCT TTGGTGCTGA TGCTGCACTG TATTTGGACG TAAAAGAATA CGGCACGTCA 
TACATCGTGA TTAGCAGCGA AACCCGCGTT TCTGCGGATG CACGCCTAGT TGATCTGCGT 
ACTGGAAAAC TGCTGTGGAG CGGAAGTGCA ACGGCGTCCA GCAACGAGCA GCAATCAAAT 
TCTAACGGCG GCATCATCGG TGCTCTGGTG CAGGCTGCGG TGAGCCAGAT TGCGGACACG 
ATCTCCGACA AAGGCCATGA TGTTGCTGGC GTGACCAGCT CGCGCCTGCT CGCGGCGGGT 
CATCCACGCG GGATGCTGTA CGGGCCTCGT TCACTGCAAT ACGGTAAAGA AACGTACTGA 

 

Protein sequence

MNRFLGLCGL VFALVLTGCA KPVPYDYTAF KQSKPKSILV LPPVNHSPDV KASYSLLSQV 
TYPLAESGYY VLPVAVVDET FKQNGLSTAA DIHALSTAKL HQIFGADAAL YLDVKEYGTS 
YIVISSETRV SADARLVDLR TGKLLWSGSA TASSNEQQSN SNGGIIGALV QAAVSQIADT 
ISDKGHDVAG VTSSRLLAAG HPRGMLYGPR SLQYGKETY