Gene PC1_4268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4268 
Symbol 
ID8135271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4830933 
End bp4831499 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content52% 
IMG OID644867590 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003019818 
Protein GI253690628 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATG AGCTAACCCA CCGTATTGGC AATACCTTGA AAACGTTGAG ACAGGAGAAA 
GGCTGGAGCC TCACACGCTC GTCAGAAGAA ACCGGCGTGA GCAAAGCGAT GCTGGGTCAG
ATCGAGCGTG GCGAATCCAG CCCAACGGTC GCCACCCTAT GGAAAATTGC AACGGGACTG
AATGTGGCGT TTTCCACCTT CATTCAACCG ACGCTCGCCG AAGAAGACGT AGCGTATCGT
TCGGTAGCAA ATTCAGCATT CAGGGAACGC GAAGCTGGTA TGCACGTTGT GCCGATCTTC
CCCTTCGATA AAAAACTGCG TTTTGATATG TTTGTTATTG AGCTGGCAGC GGGTGCCAGT
AGCACCTCAT CGGCGCATGA AAGCGGGGTG ATCGAGCATA TTATTGTGCT GGAGGGCCAA
CTGGAAATGA CCGTTGATGG GCAGACACAG TTATTATCCG CGGGGGATGC CCTGCGTTTT
GCCGCCGACA GAGAACACCG CTACCACAAC CCTGCCGATA CTACTGTTCG CTTCCACGAT
CTGATTCACT ATCCTGATAA AAATTAA
 
Protein sequence
MSDELTHRIG NTLKTLRQEK GWSLTRSSEE TGVSKAMLGQ IERGESSPTV ATLWKIATGL 
NVAFSTFIQP TLAEEDVAYR SVANSAFRER EAGMHVVPIF PFDKKLRFDM FVIELAAGAS
STSSAHESGV IEHIIVLEGQ LEMTVDGQTQ LLSAGDALRF AADREHRYHN PADTTVRFHD
LIHYPDKN