Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4268 |
Symbol | |
ID | 8135271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4830933 |
End bp | 4831499 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644867590 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003019818 |
Protein GI | 253690628 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATG AGCTAACCCA CCGTATTGGC AATACCTTGA AAACGTTGAG ACAGGAGAAA GGCTGGAGCC TCACACGCTC GTCAGAAGAA ACCGGCGTGA GCAAAGCGAT GCTGGGTCAG ATCGAGCGTG GCGAATCCAG CCCAACGGTC GCCACCCTAT GGAAAATTGC AACGGGACTG AATGTGGCGT TTTCCACCTT CATTCAACCG ACGCTCGCCG AAGAAGACGT AGCGTATCGT TCGGTAGCAA ATTCAGCATT CAGGGAACGC GAAGCTGGTA TGCACGTTGT GCCGATCTTC CCCTTCGATA AAAAACTGCG TTTTGATATG TTTGTTATTG AGCTGGCAGC GGGTGCCAGT AGCACCTCAT CGGCGCATGA AAGCGGGGTG ATCGAGCATA TTATTGTGCT GGAGGGCCAA CTGGAAATGA CCGTTGATGG GCAGACACAG TTATTATCCG CGGGGGATGC CCTGCGTTTT GCCGCCGACA GAGAACACCG CTACCACAAC CCTGCCGATA CTACTGTTCG CTTCCACGAT CTGATTCACT ATCCTGATAA AAATTAA
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Protein sequence | MSDELTHRIG NTLKTLRQEK GWSLTRSSEE TGVSKAMLGQ IERGESSPTV ATLWKIATGL NVAFSTFIQP TLAEEDVAYR SVANSAFRER EAGMHVVPIF PFDKKLRFDM FVIELAAGAS STSSAHESGV IEHIIVLEGQ LEMTVDGQTQ LLSAGDALRF AADREHRYHN PADTTVRFHD LIHYPDKN
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