| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4199 |
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| Symbol | |
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| ID | 8135197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4742246 |
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| End bp | 4743559 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867516 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_003019749 |
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| Protein GI | 253690559 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAATCA AACACCTTCC TTTCGATCAG AATCGTAATG GCTGGTCGGC AGATCTTATC
GATAAACCGA ATTACCCACA GCAGCGTGGA AAAATAACCG CGGACTGGCT GGTGATCGGC
GCAGGCTATG CGGGGATCGC CTTTGCACAG CGTCTGGCTG AACAGCGCCC GGATAAACAC
ATTATCCTGC TGGATGCGGG CGAGATTGGC GACAATGCCT CTGGGCGTAA TTCTGGTTTC
GTCATCGATT TACCGCATAA CATCGGTAGC TCGACGGCCG AGCTGGAAAA AGCGGCGGCT
TATCGCCGTC TGTTGCAGTC CGGCGTGGCG CATCTGAAAG AGAAGGTGGA TCGCCATGCT
ATCGCGTGCG ACTGGAGCGT GGCGGGTAAA TATCACTGCG CGGTCAGTTC GACGTTCAAC
GGCCTGATCG ACACCTATGT CCGTGAATTG GACGATCTGG GTGAATCCTA TCAGGTGGTG
GAAAAAGACG AGCTTGCTCG TCGCCTCGGC ACATCTTTCT ATCATCGCGC CGTGTATACC
CCCAATTGCA TTCTGCTAAA TCCGGCGGCG CTAGTAGTCG GGTTGGTGGC GAACCTGCCG
AAGAATGTGA CGGTTTACGC CCATTCTCCG GCTCTGAATA TCGAGACAGG TTCACGCATT
CGCGTGGAAA CGCCCTATGG CGAGATTCAG GCGGATAAGC TGATGATGGC GATCAACGGC
GCGGCGCGTG GCTTGCCGTT GTTCAATGGT CGGGTGTTTG CCGTGGCGAC TTTCGCGACG
CTGACGGAAC CGCTGAATGC GGAACAGATA GCACGTATGG GCGACATGCC GGACTGGGGG
CTAACGCCGG TCAATGCGCT AGCCAGTGCC ACACTACGCT ATACGCGTGA CCATCGTTTC
CTGATTCGGG AGCATGTGAA ATTTGCCCCA GAGCTGGTCA ATAGTGCGGT AGAAACCGGA
CGCCACGCGC GTCGTCACGC GGCTATTTTT GCCCGGATGT TCCCGCAGTT GAGCGATGTG
AAGATGGCGC ATACCTGGTC AGGGCTGATT AGCGTCACGC GCAACGGGGC ACCAATTTGG
GGACAGCTAA GCGACAATGT GTACGCGTCA GCAGGCTGTA ACGGGGCCGG TCTGTCGAAG
CAAACCGCTG CCGGACATAT TCTGGCGGAT TTGGCGCTGG GTGAAGACAA CCCGCTGATT
GGCGATATGC AATCGCTCGG GCAGGCGAAC TACCTGCCGC CACGCCCTTT CCTGGATGTG
GGGGTGAACG GTTACCTGAC GAGCGAACGC TGGAAAGCCC GCAGCGAGAG ATAA
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| Protein sequence | MKIKHLPFDQ NRNGWSADLI DKPNYPQQRG KITADWLVIG AGYAGIAFAQ RLAEQRPDKH
IILLDAGEIG DNASGRNSGF VIDLPHNIGS STAELEKAAA YRRLLQSGVA HLKEKVDRHA
IACDWSVAGK YHCAVSSTFN GLIDTYVREL DDLGESYQVV EKDELARRLG TSFYHRAVYT
PNCILLNPAA LVVGLVANLP KNVTVYAHSP ALNIETGSRI RVETPYGEIQ ADKLMMAING
AARGLPLFNG RVFAVATFAT LTEPLNAEQI ARMGDMPDWG LTPVNALASA TLRYTRDHRF
LIREHVKFAP ELVNSAVETG RHARRHAAIF ARMFPQLSDV KMAHTWSGLI SVTRNGAPIW
GQLSDNVYAS AGCNGAGLSK QTAAGHILAD LALGEDNPLI GDMQSLGQAN YLPPRPFLDV
GVNGYLTSER WKARSER
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