| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4176 |
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| Symbol | |
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| ID | 8135174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4714591 |
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| End bp | 4715451 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644867493 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003019726 |
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| Protein GI | 253690536 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACCG TACAGCTGGA AAAAATCACC TTTCCTCTTC TGCGCAAGCG GCCTCTACTG
CGTCGCTACG CCTTCCAACC GGGGCTATTG CTGGCCTGGC TGGTGATGCT GACCGTCGCA
CTCTGGGCGC TGTTCCCCGG CTGGTTTACC GGCTATAGCC CGACAGAGGG CATCGCGGGC
GCACAGCGAC TGGCACCCGA CGCCGACTAC TGGCTCGGCA CCGACCAGCT GGGACGTGAT
CTCTACGCGC GCATCGTTTA TGGTGCCGTG CACTCGCTTT CCGGTGCCGT TATCGCCGTC
GGGCTGGGTC TGGTGCTCGG TAGCCTGTTC GGTCTCTTGG CGGGCGCGGT GGGCGGCTGG
CTGGATAGCG TCGTGATGCG CAGCATTGAT GTGTTACTGG CTATTCCCGG CCTGCTGCTG
GCGTTGAGCG TCATCATTCT GTTGGGTTTC GGCACGGTTA ACGCCGCGAT TGCCGTGGGC
GTCACCTCCG TCGCCAGTTT CACCCGGCTG GTACGTTCAG AAGTGTTGCG CGTGCGCCAC
AGCGACTACG TCGAAGCCGC CTATGGCAGC GGCGGCACCT TTTTCAGCGT GTTATGGCGG
CACATCCTGC CGAACTCAAT GACCACCGTT TTCGCCTTTG CCGCACTGCA ATTCGGCAGT
GCGATTCTGG CCATCTCCAC GCTGAGCTTC CTCGGCTACG GCGCACCACC GCCCACGCCG
GAATGGGGAC TGCTGATCGC CGAAGGCCGC AACTACATTG CCACCGCGTG GTGGTTAACC
ACCTTCCCCG GTCTGGTTGT CGTACTCGTT GTGCTGTCCG CCAACCGCAT CAGCCAATCG
ATCAGAAGGA CGGAACGATG A
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| Protein sequence | MTTVQLEKIT FPLLRKRPLL RRYAFQPGLL LAWLVMLTVA LWALFPGWFT GYSPTEGIAG
AQRLAPDADY WLGTDQLGRD LYARIVYGAV HSLSGAVIAV GLGLVLGSLF GLLAGAVGGW
LDSVVMRSID VLLAIPGLLL ALSVIILLGF GTVNAAIAVG VTSVASFTRL VRSEVLRVRH
SDYVEAAYGS GGTFFSVLWR HILPNSMTTV FAFAALQFGS AILAISTLSF LGYGAPPPTP
EWGLLIAEGR NYIATAWWLT TFPGLVVVLV VLSANRISQS IRRTER
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