Gene PC1_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4163 
SymbolmtlR 
ID8135161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4697883 
End bp4698449 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content53% 
IMG OID644867480 
Productmannitol repressor protein 
Protein accessionYP_003019713 
Protein GI253690523 
COG category[K] Transcription 
COG ID[COG3722] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTGTG CGGGTTTAAA GGGTCGAGAA GTGACGATGG AAGAAACACA GGCGTTTGAA 
AACCGGGTTC TGGAAGCGCT GAACTCAGGG AAGACCGTGC GCGATTTTAT GCTTTGTGCC 
GTTGAATTGC TGGCTGAAGC GGTCAGTATC CTGATGTTGC AGGTGTTCCG TAAAGACGAC 
TATGCAGTGA AATATGCCGT TGAACCCTTG ATGACAGGAA CGGGCCCGCT GGGTGACCTG 
TCTGTGCGCC TGAAGCTGAT TTATGGTCTG GGAATGATCA GTCGTAAAGA GTACGAAGAT 
GCAGAGCTGT TAATGGCGCT GGGTGAAGAG CTGGCGCATG ACGATCGGCA TTACCGTTTT 
ACCGACGATG AAATTCTGGG CCCCATCGGC GAACTGCATT GCGTTACGGC GCTGCCCGCA 
GAGCCAGCTT TGCCGCAGGG AGCTGACGCT GCCGATCCGC TTCTGGTGAA CATGCAGCAG 
CAGCGCTATC AGCAGATGGT GCGTTCCACG CTAGTGTTAT CTCTAACTAC TCTGATTGCG 
CAAATTAGCC TGAAAAAGGC GTTTTAA
 
Protein sequence
MLCAGLKGRE VTMEETQAFE NRVLEALNSG KTVRDFMLCA VELLAEAVSI LMLQVFRKDD 
YAVKYAVEPL MTGTGPLGDL SVRLKLIYGL GMISRKEYED AELLMALGEE LAHDDRHYRF 
TDDEILGPIG ELHCVTALPA EPALPQGADA ADPLLVNMQQ QRYQQMVRST LVLSLTTLIA 
QISLKKAF