Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4136 |
Symbol | |
ID | 8135134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4665409 |
End bp | 4666548 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644867453 |
Product | fatty acid desaturase |
Protein accession | YP_003019686 |
Protein GI | 253690496 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAATG ACCTTCCCGC CAGACCGTAT CCGGCGCAGG GTGAACAGGC CTTTCATCGG GCGTTACAGC GCGAAACGTC GGCCTACCTG CGCGCTAATC ACGATCATCG CTTTGCCGAT AGCGGTCAAT TCGTGAAGGC CGGATTACTC TTTTTAGGCT GCATCGCCTG TTATTCCCTG AGCTTGATAC AGCAGACGGC ATGGGCATTC TTCCTGAGCT ATTTTTCTTT CATCATGCTG TCGATGGTAT TGAATATCAT CGTGAATCAT GACGCCTCCC ATAATACGTT TTTCCGTAAT CGAACGCTCA ACCGCATCGT CGGGCGGATC GTGACGCTGC CGTTAGGCAT CGATCCTGAC TACTGGCGGT TGCGCCATGT GGACTTCCAC CATATTTACC CGAATGTGGA GCATTACGAT CTGGATACGG AAGAGAATGG GATTTTTCGT CAAACGCCTT TCCAGCGCCA CCGTGCCTAC ATGCGCTATC AGCATCTTTA CTGGCCGCTG GTGGCCTCCC TGTCGCTCCC CTATATCGCC TGGGTTTTTG ACTGGGCCGA TCGGCTGGGT AAAACCCCCG TTAACGCTCG TTCCATGCAG TCAGGCTACC GTGGGTGGAT GATTTTTATC GGCAGTAAAG TCGGCCATAT CGTGCTGCTA CTGGTGATTC CTATCGTGGT GGGGGCGGCA CAGGGCATTA GCCCAGGTAT CGTGCTGTTA AGTTATTTGC TGGGCCAGAT GTTGGCCTCG CTGCTGGTGG TCTTTTTACT GCTGGGTTCG CACTGGGCGG AAACGGAATT TTATGCCGTG ACCGATACGG AGGCCATGCC TCTGGGCTGG TATCAGCACA ACTTTGCGAC CGCCTGCGAC TGGCTACCGA CGCCGCGCTG GCTTGCGCAC TGGACGGGAG GGCTGCACTT ACATCTGACG CATCATCTTT TTCCTGGGTG GCACCATCGT CATTACCCTG CGCTCGCCGC CATCTTACGG CGCCTTGCCG CCGAGCATGG TATGGACTAT CGCTGCATTA CCTACCGCGA GCTATTGGCA AGCCAGCGTC GGTTTTTAAA ATCGATGGGG GAAGGTCGCG ATCAACGCAC AGCGCAACGT GCCGAGGAAG AGGGAAGGGA GGAAGGATGA
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Protein sequence | MANDLPARPY PAQGEQAFHR ALQRETSAYL RANHDHRFAD SGQFVKAGLL FLGCIACYSL SLIQQTAWAF FLSYFSFIML SMVLNIIVNH DASHNTFFRN RTLNRIVGRI VTLPLGIDPD YWRLRHVDFH HIYPNVEHYD LDTEENGIFR QTPFQRHRAY MRYQHLYWPL VASLSLPYIA WVFDWADRLG KTPVNARSMQ SGYRGWMIFI GSKVGHIVLL LVIPIVVGAA QGISPGIVLL SYLLGQMLAS LLVVFLLLGS HWAETEFYAV TDTEAMPLGW YQHNFATACD WLPTPRWLAH WTGGLHLHLT HHLFPGWHHR HYPALAAILR RLAAEHGMDY RCITYRELLA SQRRFLKSMG EGRDQRTAQR AEEEGREEG
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