Gene PC1_4136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4136 
Symbol 
ID8135134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4665409 
End bp4666548 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content55% 
IMG OID644867453 
Productfatty acid desaturase 
Protein accessionYP_003019686 
Protein GI253690496 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATG ACCTTCCCGC CAGACCGTAT CCGGCGCAGG GTGAACAGGC CTTTCATCGG 
GCGTTACAGC GCGAAACGTC GGCCTACCTG CGCGCTAATC ACGATCATCG CTTTGCCGAT 
AGCGGTCAAT TCGTGAAGGC CGGATTACTC TTTTTAGGCT GCATCGCCTG TTATTCCCTG 
AGCTTGATAC AGCAGACGGC ATGGGCATTC TTCCTGAGCT ATTTTTCTTT CATCATGCTG 
TCGATGGTAT TGAATATCAT CGTGAATCAT GACGCCTCCC ATAATACGTT TTTCCGTAAT 
CGAACGCTCA ACCGCATCGT CGGGCGGATC GTGACGCTGC CGTTAGGCAT CGATCCTGAC 
TACTGGCGGT TGCGCCATGT GGACTTCCAC CATATTTACC CGAATGTGGA GCATTACGAT 
CTGGATACGG AAGAGAATGG GATTTTTCGT CAAACGCCTT TCCAGCGCCA CCGTGCCTAC 
ATGCGCTATC AGCATCTTTA CTGGCCGCTG GTGGCCTCCC TGTCGCTCCC CTATATCGCC 
TGGGTTTTTG ACTGGGCCGA TCGGCTGGGT AAAACCCCCG TTAACGCTCG TTCCATGCAG 
TCAGGCTACC GTGGGTGGAT GATTTTTATC GGCAGTAAAG TCGGCCATAT CGTGCTGCTA 
CTGGTGATTC CTATCGTGGT GGGGGCGGCA CAGGGCATTA GCCCAGGTAT CGTGCTGTTA 
AGTTATTTGC TGGGCCAGAT GTTGGCCTCG CTGCTGGTGG TCTTTTTACT GCTGGGTTCG 
CACTGGGCGG AAACGGAATT TTATGCCGTG ACCGATACGG AGGCCATGCC TCTGGGCTGG 
TATCAGCACA ACTTTGCGAC CGCCTGCGAC TGGCTACCGA CGCCGCGCTG GCTTGCGCAC 
TGGACGGGAG GGCTGCACTT ACATCTGACG CATCATCTTT TTCCTGGGTG GCACCATCGT 
CATTACCCTG CGCTCGCCGC CATCTTACGG CGCCTTGCCG CCGAGCATGG TATGGACTAT 
CGCTGCATTA CCTACCGCGA GCTATTGGCA AGCCAGCGTC GGTTTTTAAA ATCGATGGGG 
GAAGGTCGCG ATCAACGCAC AGCGCAACGT GCCGAGGAAG AGGGAAGGGA GGAAGGATGA
 
Protein sequence
MANDLPARPY PAQGEQAFHR ALQRETSAYL RANHDHRFAD SGQFVKAGLL FLGCIACYSL 
SLIQQTAWAF FLSYFSFIML SMVLNIIVNH DASHNTFFRN RTLNRIVGRI VTLPLGIDPD 
YWRLRHVDFH HIYPNVEHYD LDTEENGIFR QTPFQRHRAY MRYQHLYWPL VASLSLPYIA 
WVFDWADRLG KTPVNARSMQ SGYRGWMIFI GSKVGHIVLL LVIPIVVGAA QGISPGIVLL 
SYLLGQMLAS LLVVFLLLGS HWAETEFYAV TDTEAMPLGW YQHNFATACD WLPTPRWLAH 
WTGGLHLHLT HHLFPGWHHR HYPALAAILR RLAAEHGMDY RCITYRELLA SQRRFLKSMG 
EGRDQRTAQR AEEEGREEG