Gene PC1_4124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4124 
Symbol 
ID8135122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4654936 
End bp4655481 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content35% 
IMG OID644867441 
ProductHNH nuclease 
Protein accessionYP_003019674 
Protein GI253690484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000599297 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATAT ATAACACTAC GTCTGATGCA GCTAATACAG CAGTCAGAGC ATTTTTAACA 
AAGGTCGGAG AGTTCTATTT TGGATCACCT TTCAATACTG GCACTGGTAA AGGAAAAACT 
ACATGGCAAT CAATACGGGA TGTTTACTTT GAGGGTAAAT GTGCATATTG TGGAGTAAAG 
TCAGAGAGTT TGCAGATAGA ACATGTTTTA ATGTTTAACC GAACTGAATA TGGCTTACAC 
CATCCGGGGA ATATTGTACC TTGTTGTAAG TCCTGCAATA ATAGGTCAAA AAATAAAGAC 
AGGGAATATC TGTCTTGGGA AGAACACCTT AAAACCATCT GTGAATTTAA ACAAGAAATA 
GAACTGTTCG ATGTACGTAA ACAGAGAATA TTAGATAATT TCTCGAGATT TAATTACCCT 
GAACTTAATG ATAAAGAGCG GCATGCCATT CGTGTAATTG CTAATAGCCT CTATGACAAT 
ATAAAATCAG AGTCTGAAAA ATCATTGACT CTTTATAAAA AACTGGACGA AGCATTTGTT 
AAATGA
 
Protein sequence
MAIYNTTSDA ANTAVRAFLT KVGEFYFGSP FNTGTGKGKT TWQSIRDVYF EGKCAYCGVK 
SESLQIEHVL MFNRTEYGLH HPGNIVPCCK SCNNRSKNKD REYLSWEEHL KTICEFKQEI 
ELFDVRKQRI LDNFSRFNYP ELNDKERHAI RVIANSLYDN IKSESEKSLT LYKKLDEAFV 
K