Gene PC1_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4123 
Symbol 
ID8135121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4654461 
End bp4654796 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content47% 
IMG OID644867440 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003019673 
Protein GI253690483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000445956 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACAA GACAAAATTA CCATGACGTT TTCTGCCAAC GGCTAAAGCA GGCTCGATTG 
GCGAAAGGCT TATCGCAGAA AAAACTCGGC ATCGCTGCTG GAATCGATGA ATTCGTCGCA 
AGCACGCGCA TCAATCGCTA TGAGAAGGGC GTCCACGAAG CAAGTATTGA AACTGCCCAG 
CAGTTGGCAG AAGCACTCGA CGTACCGCTT GCCTACTTCT ATACAGAGAA CGATGAGTTA 
GCCGAAATGA TGTTAGCGTT TTTGGCGCTA TCACCGGAGA AGAGAGCAGA GGTTTTGGCG 
TTGGTGAAAA TAGGAAGCGA CAGTATAAAT ATTTAA
 
Protein sequence
MMTRQNYHDV FCQRLKQARL AKGLSQKKLG IAAGIDEFVA STRINRYEKG VHEASIETAQ 
QLAEALDVPL AYFYTENDEL AEMMLAFLAL SPEKRAEVLA LVKIGSDSIN I