| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4112 |
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| Symbol | |
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| ID | 8135110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4646491 |
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| End bp | 4647567 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644867430 |
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| Product | peptidase S58 DmpA |
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| Protein accession | YP_003019663 |
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| Protein GI | 253690473 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3191] L-aminopeptidase/D-esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.971314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGGCG ATCACCAGAT AAACGACTAT CACCAGCAAC AGCAGGCGCT GTTGCTACAA
CGCTGGAAAA CGACGCGGCA GTTGGGTACG CCGCGCTCGG CTAGCGGACC ACAGAACAGT
ATCAGTGATG TGGCAGGCGT GCGCGTCGGC CACTGCACGC TGGCGGCAGG GGAAGTGCAA
ACCGGCGTCA CGGCGATTGT GCCGCCCGGC GAGAACCTGT TCACTCAGCC TCTGCCCTGC
GGCGCGGCAG TGCTGAACGG CTTCGCCAAG CCCGTCGGAC TGGTACAGAT TGAGGAACTG
GGACAGTTGC AAACGCCCAT CCTGCTCAGC AACACGCTGG CGACCGGCAC GCTGTTTACC
ACGCTGGTGC GCGACGCCAT TGCCCGTAAT CCTGAACTGG GTCGCACGCT GCCGACGGTG
AACCCGCTGG CGTTGGAGTG CAACGACGGC TGGCTGAACG ACATTCAGGC GCTGGCGGTG
ACAGAGCACA TGGCGCGACA GGCGCTGGAC AGTGCAGCAG ACCGCTTCGC CCGCGGCAGC
GTCGGTGCAG GACGCGGAAT GAGCTGCTTT AGCCTGAAAG GCGGCATCGG CACCGCATCA
CGCTTGATCC CCGAATTGAA CGCCACGCTT GGCGTACTGG TGCTGGCAAA CTTCGGTACG
CTTTCCTCAC TGACGCTGGA CGGCGTGCAG ATGGGGAGCG CTATTGCGCC CATCCTGCCG
GAGCTTGCGC CACAGCAGGA TGCCGGATCG ATCATCATTA TCATGGCGAC AGATGCCCCA
CTCGACGCCC GTCAGCTGAA GCGCATCGCC AAACGCGCTG GCGCAGGGCT TGGTCGACTC
GGCAGTTACT GGGGACACGG TTCCGGTGAT ATCGCCGTCG CGTTCTCTAC CCGCCCACAG
CCACAGCCGC CGGAGGATGC GCAGCTTGAA CCGCTGTTAA GCGCCGCCGC CGACGCCACC
GAACACGCGG TACTCGACGC CATGCTTCAG GCTGACGCCG TGACCGGTTT TCGCGGCCAT
CATCGCCCGA CGCTGCCACA GGCGTTGGAT CGGCTGGCCG CAGCGCTTTA TCCATAA
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| Protein sequence | MHGDHQINDY HQQQQALLLQ RWKTTRQLGT PRSASGPQNS ISDVAGVRVG HCTLAAGEVQ
TGVTAIVPPG ENLFTQPLPC GAAVLNGFAK PVGLVQIEEL GQLQTPILLS NTLATGTLFT
TLVRDAIARN PELGRTLPTV NPLALECNDG WLNDIQALAV TEHMARQALD SAADRFARGS
VGAGRGMSCF SLKGGIGTAS RLIPELNATL GVLVLANFGT LSSLTLDGVQ MGSAIAPILP
ELAPQQDAGS IIIIMATDAP LDARQLKRIA KRAGAGLGRL GSYWGHGSGD IAVAFSTRPQ
PQPPEDAQLE PLLSAAADAT EHAVLDAMLQ ADAVTGFRGH HRPTLPQALD RLAAALYP
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