| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4050 |
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| Symbol | |
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| ID | 8135048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4580709 |
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| End bp | 4581491 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867368 |
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| Product | DNase TatD |
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| Protein accession | YP_003019601 |
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| Protein GI | 253690411 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGATA TTGGCGTTAA CCTAACCAGT TCTCAGTTTG AAAAAGACAG AGAGCAGGTC
GTCATTCGGG CGAAGCAAGC GGGTGTCAGT GGTATCTTGA TCACTGGAAC CAACGCTCAG
GAAAGCCAGC AGGCCATGTT ACTGGCGCAA GCCTATCCCG ATTATTGCTG GTCAACGGCG
GGTGTTCACC CACATGATGC CAGCCAGTGG AATGATGCTG TCGCCGAACA GATTCATCAC
ATGGCAAGCG CCGACTGCGT GGTTGCCATC GGCGAATGCG GGCTGGATTT CAACCGTAAC
TTTTCGACTC CAGAAGAACA GGAACGAGCA TTTAGCGCGC AACTAGCGAT CGCGGCTGAA
CGGTCTATGC CGGTTTTTCT TCACTGTCGT GACGCGCATT CCCGTTTTAT CTCTTTTCTC
ACCCCCTGGC TGAACCGGTT GCCTGCCGCC GTGGTTCACT GTTTTACCGG CAATCGTCAT
GAATTAGATG AATGCTTAGC TGCGGGATTG ATGGTGGGCA TTACCGGCTG GGTTTGCGAT
GAGCGTCGCG GGCTGGAGCT ACGTGCTTTA CTGCCGCATA TTCCTGCCGA TCGGCTGTTG
GTGGAAACCG ACGCACCTTA TCTGTTACCC CGGGATTTAC GCCCTAAACC GGCATCCCGC
CGTAACGAAC CCTGTTATCT GCCTCATATT ATTCGCCAGA TTGCGGAGTG GCGTGGAGAA
GATGCCACAT GGTTGGGACA GACAACAGAT GAAAATGCCC GTCGGGTTTT CCGGCTGGCC
TGA
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| Protein sequence | MFDIGVNLTS SQFEKDREQV VIRAKQAGVS GILITGTNAQ ESQQAMLLAQ AYPDYCWSTA
GVHPHDASQW NDAVAEQIHH MASADCVVAI GECGLDFNRN FSTPEEQERA FSAQLAIAAE
RSMPVFLHCR DAHSRFISFL TPWLNRLPAA VVHCFTGNRH ELDECLAAGL MVGITGWVCD
ERRGLELRAL LPHIPADRLL VETDAPYLLP RDLRPKPASR RNEPCYLPHI IRQIAEWRGE
DATWLGQTTD ENARRVFRLA
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