| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3997 |
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| Symbol | |
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| ID | 8134984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4509044 |
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| End bp | 4510408 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867304 |
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| Product | adenylosuccinate lyase |
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| Protein accession | YP_003019548 |
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| Protein GI | 253690358 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00709346 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCAC ATCTTATTGA TTTTCTTCTT ATAGGGAATA ATTTTGGCAC GCCTGAAATG
CGCGGCGTCT GGTCCGAGCA TAATCGCCTG ACTAAGCAGG TCGATGTTGA AGTTGCTCTG
GCGCTTGCCG AGGGTGAACT GGGTGTCATT CCGCTGGATG CGGCAAAAAC CATTGCAGAA
AACGCTGACG CAAGCGCGCT TAACGTTGAA GAGATTGCAA AAGATGCGGC ACGCATGAAG
CACTCTCTGA TGCCGACGAT TGCCGCGATT CAGAAACAGT GCGGCGCTGC GGGTGAATTT
ATTCACTACG GCGTGACCAC ACAGGACATC GTTGATACCG CGACAGTGTT ACAGCTGAAA
CAATCTTTTG ATATTGTTGT AAGAGATACA CAACTGCTGG CCGTTGAGCT GAAGCGTTTG
GCGAAGAAAT ATCAACACAC GCTGATGGCT GGTCGTACCC ACGGTATGCA GGCGCTTCCC
ACCACGTTTG GCTTCAAACT GGCCGTCTGG CTGGATGAAT TTATCCGCCA CCTCGAACGT
CTGACTGAAA TCAAGGAACG TGTTCTCGTC GGCAACATCA ACGGTGCCAT CTGTACCTAT
GCTTCTTTTG GCGAACAAGG GCCGGAAATC GAGCGTCTGA CGCTGGATAA ACTGGGACTG
AATACGCCGA ATATCGGCTG GCAGTCTGCC CGCGATCGCT TCTCCGAATA CGCCTCTGTT
GCGGTGCTGA TCAGCGGTAC GCTGGGTAAG ATCGGCAACG AGCTGTACAA CCTGATGCGC
ACCGAGATTA ACGAAATCGA AGAGCCGTTC TCCGAAGGGA AAATCGGTTC TACCACCATG
CCGCATAAAC GTAACCCTGC CGCATTGGAA GGGCTGGCGA GCCTGACAGC ACCGCTGTTC
AAGAGCGCCG CGCTGATTCA TGAATCCATG AAAGTTGAGC ACGAGCGTGA TGCGATGAGC
TGGCGTGCGG AGTGGATTGC GTTGCCGGAA ATCAATATCT ATCTGTCTGC TCAGCTTCAG
AACGCGCTTG GCATCCTGCG TGGGATGTCC GTCAACGAGA AGCAAATGCT GGCGAACCTC
GATCTGCAAA ATGGCCTGCT GCTGTCCGAG AAAGTCATGT TCGAGATTGG TAAACGTCTT
GGTAAGCAAA CTGCTCACCA TCTGGTTTAC GAATGCTCAA TGCAGGCATT CGAGCAAAAT
CAGTCCTTTA AATCGGTGCT GCTGGCTCAT CCGGTGCTTT CTGAGCAGGT GACCGCCGCC
GATCTGGACG AATGGCTGAA TCCGGCTAAC TACGTTGGCA GTGCGCCGCA GAAGGTTGAT
GACGTGATTC GCTATGCGGA TAACTCCGGC CTACTGCCAG CATAA
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| Protein sequence | MASHLIDFLL IGNNFGTPEM RGVWSEHNRL TKQVDVEVAL ALAEGELGVI PLDAAKTIAE
NADASALNVE EIAKDAARMK HSLMPTIAAI QKQCGAAGEF IHYGVTTQDI VDTATVLQLK
QSFDIVVRDT QLLAVELKRL AKKYQHTLMA GRTHGMQALP TTFGFKLAVW LDEFIRHLER
LTEIKERVLV GNINGAICTY ASFGEQGPEI ERLTLDKLGL NTPNIGWQSA RDRFSEYASV
AVLISGTLGK IGNELYNLMR TEINEIEEPF SEGKIGSTTM PHKRNPAALE GLASLTAPLF
KSAALIHESM KVEHERDAMS WRAEWIALPE INIYLSAQLQ NALGILRGMS VNEKQMLANL
DLQNGLLLSE KVMFEIGKRL GKQTAHHLVY ECSMQAFEQN QSFKSVLLAH PVLSEQVTAA
DLDEWLNPAN YVGSAPQKVD DVIRYADNSG LLPA
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