Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3996 |
Symbol | |
ID | 8134983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4508492 |
End bp | 4509034 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644867303 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_003019547 |
Protein GI | 253690357 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0286626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATCG TATTTCGTCA GGCTACGCTT GCGGACGATG AGACTTTTCT GGCGCTGGCG CTGGCGGCGT TTGAGCCGAT TCGCCAGTTG GGCATCAATT TTTCCGCCGC CCATGCGGAC ATCGACATGG TGCGCACGCA TATTGCCTCA CACGGCGTTT ATGTAATGGA AAAAGAGGGG GAGATGGTGT CGTCATTCAC CATCCGCTAT CCGTGGGGGC CGGAGCCAGG CCCGTTCGGT TTGCCCCATT TGGGCTGGTT TGCAACACAC CCTGGCTATA AAAAGCAGGG ACTGGGTAAG CAAATGATGG GCTGGCTGGA AGAAGAAATT CTGATTAACC AGCTCAAAGC GCCTGCGGTG TCGCTTGGCA CCGCGCAAAA CCACCCGTGG CTGATTGAGA TGTACAAAAA TTATGGTTTC AGGGAAGTCG GGCAGACGAA TCTGGGAAAA GGACACCTGA CAATCTGGAT GGAAAAAATC CTTGATAACC AATTGTATGA CCAGTGGAAA GATAAAAACT CAAAAAGAGA GGCAGTAAAA TGA
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Protein sequence | MSIVFRQATL ADDETFLALA LAAFEPIRQL GINFSAAHAD IDMVRTHIAS HGVYVMEKEG EMVSSFTIRY PWGPEPGPFG LPHLGWFATH PGYKKQGLGK QMMGWLEEEI LINQLKAPAV SLGTAQNHPW LIEMYKNYGF REVGQTNLGK GHLTIWMEKI LDNQLYDQWK DKNSKREAVK
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